@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0685: (2016-03-17 )
MKIIYFSFTGNVRRFIKRTELENTLEITAENCMEPVHEPFIIVTGTIGFGEVPEPVQSFLEVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFELHGKNKDVIEFKNKVGNFNENHGREKVQSY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_D_4(1RLJ)
NRDI_BACSU
[Raw transfer]




FMN_D_4(1RLJ)
NRDI_BACSU
[Raw transfer]




FMN_A_2(2XOD)
?
[Raw transfer]




FMN_A_2(2XOE)
?
[Raw transfer]




FMN_D_4(1RLJ)
NRDI_BACSU
[Raw transfer]




FMN_A_2(2X2P)
?
[Raw transfer]




FMN_A_2(2XOD)
?
[Raw transfer]




FMN_A_2(2X2O)
?
[Raw transfer]




FMN_B_10(4BMO)
?
[Raw transfer]




FMN_B_6(4BMP)
?
[Raw transfer]




80 Fugue 95.6144%-101 - C4 -1RLJ 9.6 NRDI_BACSU
92 HHSearch 94.5646%-108 - C4 -1RLJ 9.6 NRDI_BACSU
1 PsiBlast_PDB 92.7148%-106 - C4 -1RLJ 9.6 NRDI_BACSU
6 PsiBlast_PDB 91.6646%-114 - C4 -2XOD 9.9 ?
2 PsiBlast_PDB 91.3546%-115 - C4 -2X2O 10.0 ?
3 PsiBlast_PDB 90.4646%-109 - C4 -2X2P 9.8 ?
4 PsiBlast_PDB 90.2246%-112 - C4 -4BMO 9.7 ?
91 HHSearch 89.2545%-109 * C4 *2XOD 9.9 ?
7 PsiBlast_PDB 89.2046%-109 - C4 -2XOE 10.0 ?
5 PsiBlast_PDB 88.0546%-108 - C4 -4BMP 10.0 ?
22 PsiBlast_CBE 81.3836% -99 - C4 -3N3A - NRDI_ECOLI -
21 PsiBlast_CBE 80.3936% -98 - C4 -3N3B - NRDI_ECOLI -
9 PsiBlast_PDB 79.9636% -97 - C4 -3N3A - NRDI_ECOLI -
10 PsiBlast_PDB 79.7336% -94 - C4 -3N3B - NRDI_ECOLI -
90 HHSearch 78.6035% -97 - C4 -3N3A - NRDI_ECOLI -
8 PsiBlast_PDB 78.0536% -98 - C4 -3N39 - NRDI_ECOLI -
23 PsiBlast_CBE 76.7736% -94 - C4 -3N39 - NRDI_ECOLI -
18 PsiBlast_PDB 73.4425%-100 - C4 -4N82 - ? -
81 Fugue 71.6028% -90 - C4 -4N82 - ? -
13 PsiBlast_PDB 65.2428% -58 - C4 -2FLV - FLAV_CLOBE -