@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0791: (2016-03-18 )
MVKIVVSRKIPDKFYQQLSKLGDVVMWQKSLVPMPKDQFVTALRDADACFITLSEQIDAEILAQSPNLKVIANMAVGYDNIDVESATANNVVVTNTPNVLTETTAELGFTLMLAIARRIVEAEKYVEADAWQSWGPYLLSGKDVFNSTIGIYGMGDIGKAFARRLQGFNTNILYHNRSRHKDAEADFNATYVSFETLLAESDFIICTAPLTKETHHKFNAEAFEQMKNDAIFINIGRGQIVDETALIDALDNKEILACGLDVLANEPIDHTHPLMGRDNVLITPHIGSASVTTRDNMIQLCINNIEAVMTNQVPHTPVN

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_4(2DBQ)
GYAR_PYRHO
[Raw transfer]



NDP_K_11(2GCG)
GRHPR_HUMAN
[Raw transfer]



NAP_A_4(2DBQ)
GYAR_PYRHO
[Raw transfer]



NDP_L_12(2GCG)
GRHPR_HUMAN
[Raw transfer]



NDP_J_10(2GCG)
GRHPR_HUMAN
[Raw transfer]



NAP_A_7(2DBZ)
GYAR_PYRHO
[Raw transfer]



NAP_B_8(2DBZ)
GYAR_PYRHO
[Raw transfer]



NDP_J_10(2GCG)
GRHPR_HUMAN
[Raw transfer]



NAP_A_2(3BAZ)
HPPR_PLESU
[Raw transfer]



GOL_A_5(2DBQ)
GYAR_PYRHO
[Raw transfer]



GOL_A_17(3JTM)
FDH_ARATH
[Raw transfer]



NHE_E_5(2CUK)
?
[Raw transfer]
61 HHSearch 96.6343%-123 - C1 -2DBQ 11.3 GYAR_PYRHO
26 PsiBlast_CBE 95.6142%-123 - C1 -2DBR - GYAR_PYRHO -
22 PsiBlast_CBE 95.4142%-123 - C1 -2DBR - GYAR_PYRHO -
3 PsiBlast_PDB 95.3941%-123 - C1 -2DBQ 11.3 GYAR_PYRHO
23 PsiBlast_CBE 95.3142%-121 - C1 -2DBR - GYAR_PYRHO -
24 PsiBlast_CBE 95.0242%-124 - C1 -2DBR - GYAR_PYRHO -
1 PsiBlast_PDB 94.7842%-125 - C1 -2DBR - GYAR_PYRHO -
27 PsiBlast_CBE 94.5539%-137 - C1 -2WWR - GRHPR_HUMAN -
9 PsiBlast_PDB 94.2838%-131 - C1 -2CUK - ? -
21 PsiBlast_CBE 94.1342%-123 - C1 -2DBZ 9.0 GYAR_PYRHO
25 PsiBlast_CBE 93.7042%-125 - C1 -2DBR - GYAR_PYRHO -
71 HHSearch 93.2439%-128 * C1 *2CUK - ? -
5 PsiBlast_PDB 93.2439%-136 - C1 -2WWR - GRHPR_HUMAN -
31 PsiBlast_CBE 93.0239%-134 - C1 -2GCG 6.7 GRHPR_HUMAN
2 PsiBlast_PDB 92.9742%-121 - C1 -2DBZ 9.4 GYAR_PYRHO
32 PsiBlast_CBE 92.8138%-126 - C1 -2CUK 3.2 ?
28 PsiBlast_CBE 92.4639%-133 - C1 -2WWR - GRHPR_HUMAN -
4 PsiBlast_PDB 92.3439%-132 - C1 -2GCG 7.3 GRHPR_HUMAN
29 PsiBlast_CBE 92.1939%-129 - C1 -2GCG - GRHPR_HUMAN -
30 PsiBlast_CBE 91.5439%-128 - C1 -2GCG 6.6 GRHPR_HUMAN
58 HHSearch 89.8737%-122 - C1 -2GCG 7.3 GRHPR_HUMAN
12 PsiBlast_PDB 78.6737%-116 - C1 -3BAZ 11.1 HPPR_PLESU