@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0793: (2016-03-18 )
MTDIINKLQAFADANPQSIAVRHTTDELTYQQLMDESSKLAHRLQGSKKPMILFGHMSPYMIVGMIGAIKAGCGYVPVDTSIPEDRIKMIINKVQPEFVFNTTDESFESLEGEVFTIEDIKTSQDPVIFDSQIKDNDTVYTIFTSGSTGEPKGVQIEYASLVQFTEWMLELNKSGNKQQWLNQAPFSFDLSVMAIYPCLASGGTLNLVDKNMINKPKLLNEMLTATPINIWVSTPSFMEMCLLLPTLNEEQYGSLNEFFFCGEILPHRAAKALVSRFPSATIYNTYGPTEATVAVTSIQITQEILDQYPTLPVGVERLGARLSTTDDGELVIEGQSVSLGYLKNDQKTAEVFNFDDGIRTYHTGDKAKFENGQWFIQGRIDFQIKLNGYRMELEEIETQLRQSEFVKEAIVVPVYKNDKVIHLIGAIVPTTEVTDNAEMTKNIKNDLKSRLPEYMIPRKFEWMEQLPLTSNGKIDRKKIAEVING

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_2(4D4G)
?
[Raw transfer]



ANP_A_3(4D4I)
?
[Raw transfer]



ATP_A_3(3FCE)
DLTA_BACCR
[Raw transfer]



ATP_A_3(3FCC)
DLTA_BACCR
[Raw transfer]



AMP_A_6(4D56)
?
[Raw transfer]



AMP_A_2(3E7X)
DLTA_BACSU
[Raw transfer]



AMP_A_3(3E7W)
DLTA_BACSU
[Raw transfer]



AMP_A_6(4D57)
?
[Raw transfer]



AMP_A_3(3E7W)
DLTA_BACSU
[Raw transfer]



AMP_A_3(3DHV)
DLTA_BACCR
[Raw transfer]



GOL_A_13(3ETC)
?
[Raw transfer]



IXN_B_8(3O83)
?
[Raw transfer]
6 PsiBlast_PDB 98.0943%-103 - C4 -3FCE 7.0 DLTA_BACCR
2 PsiBlast_PDB 97.6845%-101 - C4 -3E7X 6.7 DLTA_BACSU
3 PsiBlast_PDB 97.1343%-100 - C4 -3DHV 5.2 DLTA_BACCR
5 PsiBlast_PDB 96.9243%-103 - C4 -3FCC 6.7 DLTA_BACCR
1 PsiBlast_PDB 96.8945%-102 - C4 -3E7W 6.8 DLTA_BACSU
41 HHSearch 95.9146% -95 - C4 -3E7W 6.8 DLTA_BACSU
22 PsiBlast_CBE 94.7338% -97 - C4 -3LGX - DLTA_STRP1 -
23 PsiBlast_CBE 94.2938% -95 - C4 -3LGX - DLTA_STRP1 -
4 PsiBlast_PDB 93.5843%-108 - C4 -4PZP - DLTA_BACCR -
21 PsiBlast_CBE 93.5038% -97 - C4 -3LGX - DLTA_STRP1 -
8 PsiBlast_PDB 92.0738% -93 - C4 -3LGX - DLTA_STRP1 -
14 PsiBlast_PDB 83.9930% -88 - C4 -4D57 6.7 ?
43 HHSearch 83.6928% -88 - C4 -2VSQ - -
57 HHSearch 83.3927% -85 - C4 -1AMU - GRSA_ANEMI -
10 PsiBlast_PDB 83.3230% -86 - C4 -4D4G 7.0 ?
60 Fugue 83.2227% -99 - C4 -1AMU - GRSA_ANEMI -
61 Fugue 82.1123% -81 - C4 -4DG9 - ? -
13 PsiBlast_PDB 81.8630% -88 - C4 -4D56 6.9 ?
9 PsiBlast_PDB 81.7429% -73 - C4 -2VSQ - -
20 PsiBlast_PDB 81.5023% -86 - C4 -4DG9 - ? -
12 PsiBlast_PDB 81.4830% -88 - C4 -4D4I 6.4 ?