@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0831: (2016-03-19 )
MPKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRKYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVTVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKANQVDKVLVIGAGYVSLEVLENLYERGLHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEIDAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGNDTIEFKGFLGNNIVKFFDYTFASVGVKPNELKQFDYKMVEVTQGAHANYYPGNSPLHLRVYYDTSNRQILRAAAVGKEGADKRIDVLSMAMMNQLTVDELTEFEVAYAPPYSHPKDLINMIGYKAK

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CA6_B_18(4EM3)
CDR_STAA3
[Raw transfer]



CA6_A_9(4EM3)
CDR_STAA3
[Raw transfer]



CA8_A_10(4EM4)
CDR_STAA3
[Raw transfer]



COA_A_8(4EQS)
CDR_STAA3
[Raw transfer]



CA8_B_16(4EM4)
CDR_STAA3
[Raw transfer]



CAJ_B_9(4EMW)
CDR_STAA3
[Raw transfer]



COA_B_14(4EQW)
CDR_STAA3
[Raw transfer]



COA_A_4(3ICS)
?
[Raw transfer]



COA_A_4(3ICR)
?
[Raw transfer]



COA_A_4(3ICT)
?
[Raw transfer]



FAD_A_8(4EQR)
CDR_STAA3
[Raw transfer]



FAD_B_15(1YQZ)
CDR_STAA8
[Raw transfer]



FAD_A_9(4EQS)
CDR_STAA3
[Raw transfer]



FAD_B_15(4EQW)
CDR_STAA3
[Raw transfer]



FAD_B_15(4EQS)
CDR_STAA3
[Raw transfer]



FAD_B_7(3NTD)
?
[Raw transfer]



FAD_B_15(4EQR)
CDR_STAA3
[Raw transfer]



FAD_A_5(3NTD)
?
[Raw transfer]



FAD_A_5(3NTD)
?
[Raw transfer]



FAD_A_3(4OCG)
?
[Raw transfer]



FAD_A_3(3ICS)
?
[Raw transfer]



FAD_B_8(4EQX)
CDR_STAA3
[Raw transfer]



FAD_A_4(3NTA)
?
[Raw transfer]



FAD_A_4(3NT6)
?
[Raw transfer]



FAD_B_5(4OCG)
?
[Raw transfer]
6 PsiBlast_PDB 96.4599%-115 - C1 -4EMW - CDR_STAA3 -
1 PsiBlast_PDB 96.2499%-112 * C1 *1YQZ - CDR_STAA8 -
2 PsiBlast_PDB 95.7499%-112 - C1 -4EM3 5.8 CDR_STAA3
26 PsiBlast_CBE 95.7299%-112 - C1 -4EMW 4.9 CDR_STAA3
3 PsiBlast_PDB 95.6599%-111 - C1 -4EM4 5.9 CDR_STAA3
22 PsiBlast_CBE 95.4999%-109 - C1 -4EM4 6.1 CDR_STAA3
28 PsiBlast_CBE 95.4798%-112 - C1 -4EQX 13.7 CDR_STAA3
8 PsiBlast_PDB 95.3898%-113 - C1 -4EQX - CDR_STAA3 -
5 PsiBlast_PDB 95.1598%-112 - C1 -4EQS 13.5 CDR_STAA3
27 PsiBlast_CBE 95.0098%-112 - C1 -4EQW 13.2 CDR_STAA3
25 PsiBlast_CBE 94.6298%-111 - C1 -4EQR 13.1 CDR_STAA3
24 PsiBlast_CBE 94.3198%-112 - C1 -4EQS 13.2 CDR_STAA3
21 PsiBlast_CBE 94.2399%-111 - C1 -1YQZ 13.5 CDR_STAA8
7 PsiBlast_PDB 94.2098%-111 - C1 -4EQW - CDR_STAA3 -
23 PsiBlast_CBE 93.9099%-111 - C1 -4EM3 4.6 CDR_STAA3
4 PsiBlast_PDB 93.8198%-110 - C1 -4EQR 13.3 CDR_STAA3
85 HHSearch 66.6238% -97 - C1 -3ICS 11.1 ?
15 PsiBlast_PDB 66.1133% -95 - C1 -3NTD 12.3 ?
9 PsiBlast_PDB 65.7636% -95 - C1 -3ICR 3.2 ?
84 HHSearch 64.8834% -97 - C1 -3NTD 12.3 ?
10 PsiBlast_PDB 64.6736% -95 - C1 -3ICS 3.0 ?
11 PsiBlast_PDB 64.1236% -95 - C1 -3ICT 2.5 ?
32 PsiBlast_CBE 64.1133% -93 - C1 -3NTD 11.8 ?
18 PsiBlast_PDB 62.5432% -97 - C1 -3NTA 10.3 ?
33 PsiBlast_CBE 61.7433% -91 - C1 -4OCG 1.8 ?
19 PsiBlast_PDB 60.5932% -94 - C1 -3NT6 10.5 ?
16 PsiBlast_PDB 60.1233% -92 - C1 -4OCG 12.1 ?