@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0837: (2016-03-19 )
MIRIQDNTIRDGMQQSNVRKSLIIKKEVLKQINKLNINSVEVGMCTTIEDEFNIHQFRDILSPEKELVVLTRLNEKEIKKIVKLKIHNLVVKILLPISDLHIKEKLNFSNKYYIQKIKDCLDILKKDKKGVDICFEDATRTSREKLKEYMEIISKYQVRTVTFADTVGCSTPLEYGDIFNYFVKKYSNIIFSAHCHNDLGLATANTLAAILNGAKQIETTFLGIGERAGNAPIEEIITILTKKQIESTEFTLPDVYKTSINISKILDFQISENKPIIGENIFKHESGIHQDGTKKNINMYQYLVPSDLGLKNSQVVQFPISNISSKKILHNKFKSIVNTEEIDENISFYKLVNKFSPEVAPEDTVDLLQIIKRRSKDGNFK

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PYR_A_4(3BLI)
?
[Raw transfer]



VPM_A_3(4OV9)
?
[Raw transfer]



AKG_A_2(2ZYF)
HOSC_THET2
[Raw transfer]



PYR_A_3(3BLF)
?
[Raw transfer]



HCA_A_2(2ZTK)
HOSC_THET2
[Raw transfer]



AKG_A_2(2ZTJ)
HOSC_THET2
[Raw transfer]



AKG_A_5(3IVT)
HOSM_SCHPO
[Raw transfer]



AKG_B_8(3IVT)
HOSM_SCHPO
[Raw transfer]



LYS_B_4(3MI3)
HOSM_SCHPO
[Raw transfer]



LYS_A_3(3MI3)
HOSM_SCHPO
[Raw transfer]



GOL_A_5(3RMJ)
LEU1_NEIMB
[Raw transfer]



AKG_A_5(3IVU)
HOSM_SCHPO
[Raw transfer]



AKG_B_8(3IVU)
HOSM_SCHPO
[Raw transfer]



GOL_A_5(3RMJ)
LEU1_NEIMB
[Raw transfer]
27 Fugue 88.3929% -60 - C1 -4OV4 - ? -
35 HHSearch 87.8830% -74 - C1 -3RMJ 2.6 LEU1_NEIMB
8 PsiBlast_PDB 85.6127% -78 - C1 -3BLI 2.7 ?
4 PsiBlast_PDB 85.4931% -59 - C1 -4OV9 2.9 ?
3 PsiBlast_PDB 85.4231% -59 - C1 -4OV4 - ? -
6 PsiBlast_PDB 83.9527% -77 - C1 -3BLE - ? -
7 PsiBlast_PDB 83.8527% -76 - C1 -3BLF 4.0 ?
1 PsiBlast_PDB 83.6730% -62 - C1 -3RMJ 2.5 LEU1_NEIMB
38 HHSearch 82.0228% -67 * C1 *3BLE - ? -
36 HHSearch 81.1722% -66 - C1 -3IVS - HOSM_SCHPO -
37 HHSearch 80.1919% -62 - C1 -3HQ1 - LEU1_MYCTU -
12 PsiBlast_PDB 80.1725% -74 - C1 -3IVS - HOSM_SCHPO -
15 PsiBlast_PDB 78.5927% -64 - C1 -2ZYF 2.0 HOSC_THET2
13 PsiBlast_PDB 77.9927% -64 - C1 -2ZTJ 2.4 HOSC_THET2
14 PsiBlast_PDB 77.8027% -62 - C1 -2ZTK 2.8 HOSC_THET2
34 HHSearch 76.5622% -68 - C1 -2ZTJ - HOSC_THET2 -
40 HHSearch 73.3016% -67 - C1 -1YDO - HMGCL_BACSU -
44 HHSearch 72.0117% -57 - C1 -2NX9 - ? -
41 HHSearch 71.9316% -66 - C1 -2FTP - LIUE_PSEAE -
42 HHSearch 70.4821% -64 - C1 -2CW6 - HMGCL_HUMAN -
11 PsiBlast_PDB 66.4331% -75 - C1 -3MI3 4.0 HOSM_SCHPO
21 PsiBlast_CBE 66.3631% -76 - C1 -3MI3 4.0 HOSM_SCHPO
23 PsiBlast_CBE 65.3631% -73 - C1 -3IVT 3.9 HOSM_SCHPO
9 PsiBlast_PDB 65.1731% -74 - C1 -3IVT 4.0 HOSM_SCHPO
22 PsiBlast_CBE 63.4031% -74 - C1 -3IVU 3.7 HOSM_SCHPO
10 PsiBlast_PDB 63.2331% -77 - C1 -3IVU 3.7 HOSM_SCHPO