@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0852: (2016-03-19 )
MENILEVNQIKKYYKIKTGLLQKTQYVKAVDDVSFSIKKGQTFGLVGESGCGKSTLGKVIIRLEDATSGSIIVNGEDITRLQGKKLRKSRQQYQMIFQDPYASLNPMQMVGDIISEPILNYKKLPKEEIKKEVLYLLKCVGLSEDAYYKYAHEFSGGQRQRVGIARALALRPSLIVADEPVSALDVSVQSQVLNLLKDLQEQFKLSYLFIAHDLSVVKHISDVIGVMYLGHIVEIASDKEIYENPKHPYTKALISSIPQIDKHNNNRIILKGELPSPSNPPQGCPFHTRCPIAKDKCKENIPQLKDIGNEHQVACFYVDKVGDLNA

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]




ATP_D_12(1XEF)

[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_B_2(2FFA)

[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]




ADP_B_10(1G9X)
LIVG_METJA
[Raw transfer]




ADP_A_2(5DGX)
?
[Raw transfer]




ADP_A_4(1G6H)
LIVG_METJA
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




ADP_C_12(1G9X)
LIVG_METJA
[Raw transfer]




ADP_A_8(1G9X)
LIVG_METJA
[Raw transfer]




4 PsiBlast_PDB 89.6332%-104 - C1 -4FWI - ? -
79 HHSearch 86.0537%-116 * C1 *3TUI - METN_ECOLI -
99 Fugue 85.5131% -87 - C1 -3TUZ - METN_ECOLI -
2 PsiBlast_PDB 85.3238%-114 - C1 -3TUI - METN_ECOLI -
93 HHSearch 84.4333%-114 - C1 -1B0U - HISP_SALTY -
3 PsiBlast_PDB 83.9038%-117 - C1 -3TUZ - METN_ECOLI -
24 PsiBlast_CBE 83.2238%-116 - C1 -3TUI - METN_ECOLI -
25 PsiBlast_CBE 83.0038%-113 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 82.6638%-108 - C1 -3TUI - METN_ECOLI -
21 PsiBlast_CBE 81.4538%-110 - C1 -3TUZ - METN_ECOLI -
22 PsiBlast_CBE 81.4238%-113 - C1 -3TUZ - METN_ECOLI -
23 PsiBlast_CBE 81.1738%-112 - C1 -3TUZ - METN_ECOLI -
8 PsiBlast_PDB 79.2930%-108 - C1 -2OLJ - ? -
34 PsiBlast_CBE 78.4034%-122 - C1 -4YMU 4.6 ?
35 PsiBlast_CBE 78.3534%-120 - C1 -4YMU 4.3 ?
95 HHSearch 78.2332%-108 - C1 -2OLJ - ? -
29 PsiBlast_CBE 77.9231%-107 - C1 -4U02 - ? -
33 PsiBlast_CBE 77.4434%-116 - C1 -4YMV 3.6 ?
10 PsiBlast_PDB 77.0330%-110 - C1 -2OUK - ? -
32 PsiBlast_CBE 76.8534%-120 - C1 -4YMV 4.2 ?
37 PsiBlast_CBE 76.6432%-119 - C1 -1B0U 4.0 HISP_SALTY
16 PsiBlast_PDB 73.7434%-128 - C1 -1VCI 2.8 ?
6 PsiBlast_PDB 73.7331%-110 - C1 -4U00 6.2 ?
62 PsiBlast_CBE 70.5934% -85 - C1 -3FVQ 6.6 FBPC_NEIG1
63 PsiBlast_CBE 68.3934% -85 - C1 -3FVQ 5.5 FBPC_NEIG1
64 PsiBlast_CBE 64.5133%-119 - C1 -1G6H 4.4 LIVG_METJA
67 PsiBlast_CBE 58.8832%-123 - C1 -1G9X 3.2 LIVG_METJA
42 PsiBlast_CBE 58.5832%-100 - C1 -2FGK 5.2
53 PsiBlast_CBE 58.4132%-111 - C1 -1XEF 5.2 HLYBP_ECOLX
55 PsiBlast_CBE 58.3732%-106 - C1 -1XEF 4.6 HLYBP_ECOLX
47 PsiBlast_CBE 58.3432%-104 - C1 -2FGJ 4.7
39 PsiBlast_CBE 58.3133% -98 - C1 -2FF7 4.4
38 PsiBlast_CBE 58.0933%-101 - C1 -2PMK 4.9
48 PsiBlast_CBE 57.6732%-103 - C1 -2FGJ 5.2 HLYBP_ECOLX
44 PsiBlast_CBE 57.5032% -99 - C1 -2FGK 5.4 HLYBP_ECOLX
49 PsiBlast_CBE 57.4732%-107 - C1 -2FGJ 5.2 HLYBP_ECOLX
59 PsiBlast_CBE 57.4632% -92 - C1 -2HYD 3.3 Y1866_STAAM
54 PsiBlast_CBE 57.3932%-106 - C1 -1XEF 5.2 HLYBP_ECOLX
66 PsiBlast_CBE 57.3732%-124 - C1 -1G9X 3.7 LIVG_METJA
56 PsiBlast_CBE 57.2432% -88 - C1 -2ONJ 5.9 Y1866_STAAM
58 PsiBlast_CBE 57.2032% -92 - C1 -2HYD 3.2 Y1866_STAAM
57 PsiBlast_CBE 57.0932% -88 - C1 -2ONJ 5.8 Y1866_STAAM
46 PsiBlast_CBE 56.7632% -97 - C1 -2FFB 4.4
52 PsiBlast_CBE 56.6332%-106 - C1 -1XEF 5.1
50 PsiBlast_CBE 56.4032%-104 - C1 -2FGJ 4.9 HLYBP_ECOLX
45 PsiBlast_CBE 56.0432% -99 - C1 -2FGK 5.3 HLYBP_ECOLX
51 PsiBlast_CBE 56.0232% -99 - C1 -2FFA 4.4
65 PsiBlast_CBE 53.4932%-120 - C1 -1G9X 2.6 LIVG_METJA
41 PsiBlast_CBE 53.2732%-101 - C1 -3B5J 4.4
43 PsiBlast_CBE 52.8032% -98 - C1 -2FGK 4.8 HLYBP_ECOLX
73 PsiBlast_CBE 37.3431% -72 - C1 -5DGX 4.6 ?