@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0869: (2016-03-19 )
MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFHAIK

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_5(4CV0)
?
[Raw transfer]




NDP_B_8(4CV0)
?
[Raw transfer]




NDP_C_12(4CV0)
?
[Raw transfer]




NAP_A_5(3GR6)
FABI_STAAR
[Raw transfer]




NAP_A_4(4NZ9)
?
[Raw transfer]




NAP_D_7(3GR6)
FABI_STAAR
[Raw transfer]




NAP_B_7(4ALL)
?
[Raw transfer]




NAP_C_9(4ALL)
?
[Raw transfer]




NAP_A_6(4ALL)
?
[Raw transfer]




NDP_D_15(4CV0)
?
[Raw transfer]




NAP_B_6(4NZ9)
?
[Raw transfer]




NAP_G_9(3GR6)
FABI_STAAR
[Raw transfer]




0WD_A_2(4FS3)
FABI_STAAR
[Raw transfer]




NAP_D_12(4ALL)
?
[Raw transfer]




NAP_J_11(3GR6)
FABI_STAAR
[Raw transfer]




NAD_A_5(1DFI)
FABI_ECOLI
[Raw transfer]




74 PsiBlast_CBE 96.3299%-106 - C3 -4CV1 - ? -
96 PsiBlast_CBE 95.9299%-105 - C3 -4BNM - ? -
73 PsiBlast_CBE 95.9099%-109 - C3 -4CV1 - ? -
78 PsiBlast_CBE 95.8199%-104 - C3 -4CV0 11.4 ?
77 PsiBlast_CBE 95.7099%-104 - C3 -4CV0 11.8 ?
93 PsiBlast_CBE 95.3999%-103 - C3 -4BNN - ? -
97 PsiBlast_CBE 95.3599%-102 - C3 -4BNM - ? -
57 PsiBlast_CBE 95.2499%-102 - C3 -4D42 - ? -
6 PsiBlast_PDB 95.2299%-104 - C3 -4FS3 10.5 FABI_STAAR
41 PsiBlast_CBE 95.1799%-103 - C3 -4D44 - ? -
59 PsiBlast_CBE 95.1399%-103 - C3 -4D42 - ? -
68 PsiBlast_CBE 95.1199%-107 - C3 -4CV1 - ? -
101 PsiBlast_CBE 95.0299%-102 - C3 -4BNM - ? -
72 PsiBlast_CBE 95.0099%-106 - C3 -4CV1 - ? -
16 PsiBlast_PDB 94.8899%-104 - C3 -4BNJ - ? -
25 PsiBlast_CBE 94.85100%-105 - C3 -4ALL 11.4 ?
94 PsiBlast_CBE 94.8399%-104 * C3 *4BNN - ? -
54 PsiBlast_CBE 94.8399%-105 - C3 -4D42 - ? -
40 PsiBlast_CBE 94.7899%-102 - C3 -4D44 - ? -
91 PsiBlast_CBE 94.7699%-104 - C3 -4BNN - ? -
26 PsiBlast_CBE 94.65100%-105 - C3 -4ALL 11.7 ?
4 PsiBlast_PDB 94.56100%-104 - C3 -4ALL 10.6 ?
27 PsiBlast_CBE 94.51100%-104 - C3 -4ALL 11.0 ?
3 PsiBlast_PDB 93.95100% -99 - C3 -4NZ9 12.5 ?
76 PsiBlast_CBE 93.6899%-104 - C3 -4CV0 10.8 ?
79 PsiBlast_CBE 93.5799%-105 - C3 -4CV0 12.3 ?
23 PsiBlast_CBE 93.20100%-102 - C3 -3GR6 11.9 FABI_STAAR
21 PsiBlast_CBE 92.75100%-106 - C3 -3GR6 10.2 FABI_STAAR
22 PsiBlast_CBE 92.07100%-102 - C3 -3GR6 9.9 FABI_STAAR
2 PsiBlast_PDB 92.03100%-101 - C3 -3GR6 11.5 FABI_STAAR
24 PsiBlast_CBE 91.27100% -98 - C3 -4NZ9 12.8 ?
126 Fugue 62.7643%-101 - C3 -1DFI 6.8 FABI_ECOLI