@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0902: (2016-03-20 )
MKLSLNSNSKYLRAPSIRQFSNRMNNLDDCVNLTIGQPDFPMPDVVKKAYIDAINNDKTSYSHNKGLLETREAISQYFKNRYHFSYDPEEIIVTNGASEAIDTTLRSIIEPGDEIIIPGPIYAGYIPLIEVLGGKPIYIDTTATQFKITPDALESHISPKTKAVLLNYPTNPTGVVLKRNEVLNIVNVLKKYPIFIISDEIYAENTFSGKHVSFAEFEDIRDQLILIGGLSKSHSATGIRIGFLLGPQYLIDKLTFMHAYNCICANVPAQIACITALNEGLEAPKYMNEAYVERRNYLVSELTKLGFEITAQPEGAFYIFPSIKHITDDDFEFCVDLLESTHLAIVPGSSFTEFGKGFVRISYAYEMDVLKEGMKRLAKYLNTK

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ASP_D_4(1GCK)
AAT_THET8
[Raw transfer]




EPE_G_7(2DOU)
?
[Raw transfer]




GOL_A_8(3E2Y)
KAT3_MOUSE
[Raw transfer]




PLP_F_6(1GDE)
?
[Raw transfer]




ASP_C_3(1GCK)
AAT_THET8
[Raw transfer]




UNL_A_4(1VP4)
?
[Raw transfer]




PLP_B_4(1DJU)
?
[Raw transfer]




PLP_A_12(1O4S)
AAT_THEMA
[Raw transfer]




PLP_B_13(1O4S)
AAT_THEMA
[Raw transfer]




PLP_A_3(1GD9)
?
[Raw transfer]




GLU_D_4(1GDE)
?
[Raw transfer]




PLP_B_4(1GD9)
?
[Raw transfer]




PLP_F_6(1GCK)
AAT_THET8
[Raw transfer]




PLP_A_3(1J32)
?
[Raw transfer]




PLP_E_5(1GCK)
AAT_THET8
[Raw transfer]




PLP_B_4(1J32)
?
[Raw transfer]




PLP_B_6(1B5P)
AAT_THET8
[Raw transfer]




PLP_B_6(5BJ4)
AAT_THET8
[Raw transfer]




PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]




PLP_A_5(5BJ4)
AAT_THET8
[Raw transfer]




PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]




PLP_B_6(1B5O)
AAT_THET8
[Raw transfer]




MES_A_3(3JTX)
?
[Raw transfer]




48 HHSearch 96.0133%-106 - C1 -1J32 4.0 ?
46 HHSearch 93.5933%-108 - C1 -1GD9 3.9 ?
3 PsiBlast_PDB 92.9632%-105 - C1 -1GD9 - ? -
25 PsiBlast_CBE 91.8533%-107 - C1 -1J32 4.6 ?
2 PsiBlast_PDB 91.7132%-101 - C1 -1GDE - ? -
23 PsiBlast_CBE 91.6032%-104 - C1 -1GD9 3.9 ?
22 PsiBlast_CBE 91.1332%-102 - C1 -1GDE 5.2 ?
5 PsiBlast_PDB 90.9333%-104 - C1 -1J32 - ? -
28 PsiBlast_CBE 89.8933%-111 - C1 -1XI9 - ? -
7 PsiBlast_PDB 89.4233%-111 - C1 -1XI9 - ? -
29 PsiBlast_CBE 89.3633%-111 - C1 -1XI9 - ? -
51 HHSearch 88.9036%-109 - C1 -1O4S 4.4 AAT_THEMA
61 HHSearch 88.7133%-103 - C1 -1XI9 - ? -
27 PsiBlast_CBE 88.4933%-109 - C1 -1XI9 - ? -
4 PsiBlast_PDB 87.6832%-107 - C1 -1DJU - ? -
21 PsiBlast_CBE 87.6335%-109 - C1 -1O4S 4.1 AAT_THEMA
24 PsiBlast_CBE 87.0332%-107 - C1 -1DJU 4.0 ?
53 HHSearch 86.5632%-107 * C1 *1B5P 4.0 AAT_THET8
11 PsiBlast_PDB 86.4932%-106 - C1 -5BJ4 4.2 AAT_THET8
1 PsiBlast_PDB 86.3535%-107 - C1 -1O4S - AAT_THEMA -
26 PsiBlast_CBE 86.1832%-105 - C1 -1B5O 4.4 AAT_THET8
13 PsiBlast_PDB 86.1632%-106 - C1 -1B5P 4.0 AAT_THET8
12 PsiBlast_PDB 85.3432%-105 - C1 -1GCK 4.9 AAT_THET8
30 PsiBlast_CBE 84.3932%-105 - C1 -5BJ4 4.5 AAT_THET8
41 PsiBlast_CBE 83.3832%-103 - C1 -1GCK 6.0 AAT_THET8
42 PsiBlast_CBE 82.7932%-105 - C1 -1B5P 4.2 AAT_THET8