@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0912: (2016-03-20 )
MNFPWDQLLVKGNWMITMAQIGAPFLVIGLIAVITYFKLWKYLYKEWFTSVDHKKIGIMYLICAVLMFVRGGIDALLIRAQLTVPDNKFLESNHYNEIFSTHGVIMIIFMAMPFIFGLWNIVVPLQIGARDVAFPVLNNVSFWLFFAGMILFNLSFIIGGSPAAGWTNYAPLAGEFSPGPGVNYYLIAIQISGLGTLATGINFFVTILRCKTPTMKFMQMPMFTVTTFITTLIVILAFPPLTVALALMTTDRIFDTAFFTVAHGGMPMLWANFFWVWGHPEVYIVILPAFGIYSEIIPTFARKRLFGHQSMVWATAGIAFLSFLVWVHHFFTMGNGALINSFFSISTMLIGIPTGVKLFNWLLTLYKGRITFESPMLFSLAFIPNFLLGGVTGVMLAMASADYQYHNTYFLVAHFHYTLVTGVVFACLAGLIFWYPKMMGYKLNETLNKWCFWFFMIGFNVCFLPQFILGLDGMPRRLYTYMPSDGWFLLNLISTIGALLMAIGFLFLVVSIVYSHFKSPREATGDNWDGLGRTLEWTTASAIPPKYNFAITPDWNDYDTFVDMKEHGRHYLDNHNYKDIHMPNNTPVGFWIGIFMTIGGFFLIFETVIPALICLFGIFGTMIYRSFQIDHGYHIPAAEVAETEARLREARIKEREAVSHES

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEA_A_6(3HB3)
COX1B_PARDE
[Raw transfer]



HEA_A_11(1AR1)
COX1B_PARDE
[Raw transfer]
2 PsiBlast_PDB 92.4742%-141 - C1 -2YEV - COX13_THET8 -
22 PsiBlast_CBE 92.3142%-141 - C1 -2YEV - COX13_THET8 -
83 HHSearch 90.9239%-146 - C1 -2YEV - COX13_THET8 -
1 PsiBlast_PDB 89.6450%-147 - C1 -1FFT - CYOB_ECOLI -
82 HHSearch 89.0750%-149 - C1 -1FFT - CYOB_ECOLI -
21 PsiBlast_CBE 89.0750%-148 - C1 -1FFT - CYOB_ECOLI -
81 PsiBlast_CBE 88.9337%-152 - C1 -3OMI - ? -
79 PsiBlast_CBE 88.5637%-152 - C1 -3OMN - ? -
11 PsiBlast_PDB 88.5036%-151 - C1 -3FYI - COX1_RHOSH -
25 PsiBlast_CBE 88.3336%-153 - C1 -3DTU - COX1_RHOSH -
77 PsiBlast_CBE 88.2737%-152 - C1 -3OM3 - ? -
9 PsiBlast_PDB 88.1736%-152 - C1 -3DTU - COX1_RHOSH -
75 PsiBlast_CBE 88.1637%-152 - C1 -3OMA - ? -
10 PsiBlast_PDB 88.1136%-151 - C1 -3FYE - COX1_RHOSH -
3 PsiBlast_PDB 88.0937%-147 - C1 -1AR1 12.9 COX1B_PARDE
8 PsiBlast_PDB 87.9136%-153 - C1 -2GSM - COX1_RHOSH -
85 HHSearch 87.6338%-152 - C1 -2GSM - COX1_RHOSH -
74 PsiBlast_CBE 87.5237%-152 - C1 -3OMA - ? -
23 PsiBlast_CBE 87.4436%-151 - C1 -3FYI - COX1_RHOSH -
24 PsiBlast_CBE 87.3136%-151 - C1 -3FYE - COX1_RHOSH -
4 PsiBlast_PDB 86.2937%-148 - C1 -3HB3 12.7 COX1B_PARDE