@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0924: (2016-03-20 )
MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQFDSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQRQCDIRPDDSKEQLEEKVKKLEYELYPSVIAKIVK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GAR_F_6(1C3E)
PUR3_ECOLI
[Raw transfer]




GAR_D_4(1C2T)
PUR3_ECOLI
[Raw transfer]




GOL_A_5(3KCQ)
?
[Raw transfer]




GAR_B_7(1CDE)
PUR3_ECOLI
[Raw transfer]




GAR_C_9(1CDE)
PUR3_ECOLI
[Raw transfer]




GAR_D_11(1CDE)
PUR3_ECOLI
[Raw transfer]




GOL_B_13(3P9X)
?
[Raw transfer]




78 HHSearch 96.4847%-122 - C4 -3P9X - ? -
2 PsiBlast_PDB 96.1146%-122 - C4 -3P9X - ? -
21 PsiBlast_CBE 95.5546%-126 - C4 -3P9X 2.2 ?
81 HHSearch 88.5635%-124 - C4 -2YWR - ? -
1 PsiBlast_PDB 88.3748% -93 - C4 -3AV3 - ? -
3 PsiBlast_PDB 87.2640%-126 - C4 -4S1N - ? -
82 HHSearch 86.8532%-124 - C4 -1JKX - PUR3_ECOLI -
4 PsiBlast_PDB 86.4135%-120 - C4 -2YWR - ? -
22 PsiBlast_CBE 85.8232%-122 - C4 -1JKX - PUR3_ECOLI -
32 PsiBlast_CBE 85.5532%-120 - C4 -1C3E 2.8 PUR3_ECOLI
31 PsiBlast_CBE 85.4732%-120 - C4 -1C2T 2.8 PUR3_ECOLI
24 PsiBlast_CBE 85.2932%-121 - C4 -1JKX - PUR3_ECOLI -
10 PsiBlast_PDB 84.7632%-119 - C4 -1JKX - PUR3_ECOLI -
23 PsiBlast_CBE 84.7132%-118 - C4 -1JKX - PUR3_ECOLI -
12 PsiBlast_PDB 84.5332%-121 - C4 -1C3E - PUR3_ECOLI -
29 PsiBlast_CBE 84.2632%-117 - C4 -1CDE 3.6 PUR3_ECOLI
15 PsiBlast_PDB 84.1836%-117 - C4 -4DS3 - ? -
9 PsiBlast_PDB 84.1532%-121 * C4 *1C2T - PUR3_ECOLI -
83 HHSearch 83.9229%-119 - C4 -3DA8 - PUR3_MYCTU -
11 PsiBlast_PDB 83.8732%-117 - C4 -1CDE - PUR3_ECOLI -
27 PsiBlast_CBE 83.3532%-117 - C4 -1CDE 3.7 PUR3_ECOLI
28 PsiBlast_CBE 83.0132%-117 - C4 -1CDE 3.7 PUR3_ECOLI
84 HHSearch 82.8130%-128 - C4 -3KCQ 1.8 ?