@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0926: (2016-03-20 )
MNVLVIGAGGREHALAYKLNQSNLVKQEFVIPGNEAMTPIAEVHTEISESNHQGILDFAKQQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMKKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVVFETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVLKLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMESDLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKKQGDTFVTSGGRVILAIGKGDNVQDAQRDAYEKVSQIQSDHLFYRHDIANKALQLK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(2YW2)
PUR2_AQUAE
[Raw transfer]



ATP_A_5(2YW2)
PUR2_AQUAE
[Raw transfer]



ATP_B_6(2YW2)
PUR2_AQUAE
[Raw transfer]



ANP_A_2(2XCL)
PUR2_BACSU
[Raw transfer]



ADP_A_5(2XD4)
PUR2_BACSU
[Raw transfer]



ANP_A_2(2XCL)
PUR2_BACSU
[Raw transfer]



ATP_A_8(2QK4)
PUR2_HUMAN
[Raw transfer]



ATP_A_8(2QK4)
PUR2_HUMAN
[Raw transfer]



GOL_A_2(3MJF)
PUR2_YERPE
[Raw transfer]



AMP_A_4(2YRX)
?
[Raw transfer]



GLY_A_2(2YS6)
?
[Raw transfer]
1 PsiBlast_PDB 95.9850%-106 - C1 -2YRW - ? -
2 PsiBlast_PDB 95.3850%-104 - C1 -2YRX - ? -
3 PsiBlast_PDB 94.5050%-106 - C1 -2YS6 2.3 ?
5 PsiBlast_PDB 94.1450%-100 - C1 -2XD4 5.0 PUR2_BACSU
6 PsiBlast_PDB 93.1148% -99 - C1 -2XCL 5.1 PUR2_BACSU
68 HHSearch 92.4548% -97 - C1 -2YRX 3.5 ?
12 PsiBlast_PDB 89.5540% -89 - C1 -3MJF - PUR2_YERPE -
66 HHSearch 88.1747% -88 - C1 -2XCL 5.1 PUR2_BACSU
7 PsiBlast_PDB 87.9643% -92 - C1 -2YW2 6.5 PUR2_AQUAE
21 PsiBlast_CBE 87.6843% -94 - C1 -2YW2 6.1 PUR2_AQUAE
8 PsiBlast_PDB 87.4043% -91 - C1 -2YYA - PUR2_AQUAE -
11 PsiBlast_PDB 87.1740% -98 - C1 -2IP4 - ? -
10 PsiBlast_PDB 86.8142% -93 - C1 -2QK4 5.8 PUR2_HUMAN
70 HHSearch 85.8140% -87 * C1 *2QK4 5.8 PUR2_HUMAN
71 HHSearch 85.3938% -85 - C1 -3MJF 2.7 PUR2_YERPE
69 HHSearch 84.8241% -88 - C1 -2YW2 6.5 PUR2_AQUAE
67 HHSearch 84.2940% -88 - C1 -2IP4 - ? -
72 HHSearch 83.7738% -96 - C1 -3LP8 - ? -
13 PsiBlast_PDB 83.4137% -94 - C1 -3LP8 - ? -
14 PsiBlast_PDB 74.4434% -77 - C1 -1VKZ - PUR2_THEMA -