@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0928: (2016-03-20 )
MLKVSDLRLKYPNGQRKIFDHLNITIQDKEKVLLLGPSGCGKSTLLNVLSGIVPNLIELPMKYDELIVDPLSGVIFQDPDSQFCMPKVYEELAFVLENRQVPREDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAMLDVQATEDLWTKLIELWEDQTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPEIILQKYVHLLSEYGVWHPRAWEFAPSRVDFPTTNSHLLQFKNGRIIRGKSTLLSFSDLEIGLGEWITITGANGSGKTTLLESIMQLIKYQGDVYFENQRLTKIKHAAKHMYLVYQNPELQFITNSVYDEINIHFNHLSKDQSDDETIQLLKLLDLQNVKDQHPYELSIGQKRRLSVATALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRINLGQSIVMVTHDDEIIERYPSRRLKISDGALLDCDGDTNV

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMV)
?
[Raw transfer]



ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]



ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ADP_A_6(3BK7)
?
[Raw transfer]



ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]
28 HHSearch 79.0120% -90 - C- -2IW3 - EF3A_YEAST -
51 Fugue 78.2721% -74 - C1 -1YQT - ? -
30 HHSearch 76.8119% -75 - C1 -3J16 - RLI1_YEAST -
29 HHSearch 75.2022% -85 - C1 -3BK7 5.8 ?
31 HHSearch 74.0522% -85 - C1 -1YQT - ? -
6 PsiBlast_PDB 73.8929%-106 - C1 -1Z47 - ? -
1 PsiBlast_PDB 71.5929% -99 - C1 -4HUQ - ECFA1_LACBA -
9 PsiBlast_PDB 69.1128%-115 - C1 -3GFO - ECFA3_CLOP1 -
2 PsiBlast_PDB 67.3329% -91 - C1 -4HZU - ECFA1_LACBA -
54 Fugue 66.4820% -84 - C1 -1Z47 - ? -
50 HHSearch 66.3729%-102 - C1 -2IT1 - ? -
17 PsiBlast_PDB 66.3629% -95 - C1 -2OUK - ? -
15 PsiBlast_PDB 65.2229% -99 - C1 -2OLJ - ? -
16 PsiBlast_PDB 64.9829% -93 - C1 -2OLK - ? -
19 PsiBlast_PDB 64.7229% -93 - C1 -3C4J - ? -
58 Fugue 64.6917% -89 - C1 -1OXS - ? -
57 Fugue 64.1619% -62 - C1 -3J16 - RLI1_YEAST -
43 HHSearch 63.4719% -96 - C1 -1OXX - ? -
32 HHSearch 63.4319% -72 - C1 -3OZX - ? -
59 Fugue 63.2225% -82 - C1 -2PJZ - ? -
21 PsiBlast_CBE 62.1231% -83 - C1 -4HLU 4.7 ECFA2_THEMA
5 PsiBlast_PDB 61.9931% -82 - C1 -4HLU 4.4 ECFA2_THEMA
23 PsiBlast_CBE 56.4431% -78 - C1 -3TIF 4.5 Y796_METJA
25 PsiBlast_CBE 55.7431% -75 - C1 -1L2T 4.4 Y796_METJA
24 PsiBlast_CBE 54.9231% -71 - C1 -3TIF 4.3 Y796_METJA
4 PsiBlast_PDB 54.5731% -77 - C1 -4ZIR 3.5 ECFA2_THEMA
26 PsiBlast_CBE 54.3131% -71 - C1 -1L2T 4.7 Y796_METJA