@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0939: (2016-03-20 )
MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIKRGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_D_4(1LSU)
KTRA_BACSU
[Raw transfer]




ADP_B_6(4J91)
KTRA_BACSU
[Raw transfer]




ATP_B_4(4J90)
KTRA_BACSU
[Raw transfer]




NAI_C_3(1LSU)
KTRA_BACSU
[Raw transfer]




ADP_A_5(4J91)
KTRA_BACSU
[Raw transfer]




NAI_L_12(2HMS)
KTRA_BACSU
[Raw transfer]




NAI_D_4(1LSU)
KTRA_BACSU
[Raw transfer]




NAI_J_10(2HMS)
KTRA_BACSU
[Raw transfer]




NAI_L_12(2HMS)
KTRA_BACSU
[Raw transfer]




NAI_D_4(1LSU)
KTRA_BACSU
[Raw transfer]




NAI_J_10(2HMS)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMU)
KTRA_BACSU
[Raw transfer]




NAI_I_9(2HMT)
KTRA_BACSU
[Raw transfer]




NAI_I_9(2HMT)
KTRA_BACSU
[Raw transfer]




ATP_A_3(4J90)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMW)
KTRA_BACSU
[Raw transfer]




ATP_B_4(4J90)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMW)
KTRA_BACSU
[Raw transfer]




NAI_M_13(2HMT)
KTRA_BACSU
[Raw transfer]




ADP_M_13(2HMV)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMU)
KTRA_BACSU
[Raw transfer]




ADP_D_8(4J91)
KTRA_BACSU
[Raw transfer]




ADP_B_6(4J91)
KTRA_BACSU
[Raw transfer]




ADP_I_9(2HMV)
KTRA_BACSU
[Raw transfer]




22 PsiBlast_CBE 97.1254%-124 - C3 -4J7C - KTRA_BACSU -
21 PsiBlast_CBE 96.9754%-122 - C3 -4J7C - KTRA_BACSU -
25 PsiBlast_CBE 96.9254%-121 - C3 -4J7C - KTRA_BACSU -
27 PsiBlast_CBE 96.7954%-121 - C3 -4J7C - KTRA_BACSU -
24 PsiBlast_CBE 96.5154%-123 - C3 -4J7C - KTRA_BACSU -
26 PsiBlast_CBE 96.2854%-120 - C3 -4J7C - KTRA_BACSU -
23 PsiBlast_CBE 96.2054%-121 - C3 -4J7C - KTRA_BACSU -
30 PsiBlast_CBE 95.9853%-125 - C3 -4J90 7.3 KTRA_BACSU
1 PsiBlast_PDB 95.9554%-123 - C3 -4J7C - KTRA_BACSU -
2 PsiBlast_PDB 95.8053%-125 - C3 -4J90 Error KTRA_BACSU
29 PsiBlast_CBE 94.5953%-130 - C3 -4J91 6.3 KTRA_BACSU
28 PsiBlast_CBE 93.3553%-132 - C3 -4J91 6.4 KTRA_BACSU
3 PsiBlast_PDB 92.4053%-140 - C3 -4J91 Error KTRA_BACSU
5 PsiBlast_PDB 78.0057%-128 - C3 -2HMS Error KTRA_BACSU
37 PsiBlast_CBE 77.7057%-129 - C3 -2HMS Error KTRA_BACSU
35 PsiBlast_CBE 77.6857%-132 - C3 -2HMT 4.0 KTRA_BACSU
17 PsiBlast_PDB 77.3827%-112 - C3 -2AEJ - MTHK_METTH -
8 PsiBlast_PDB 77.1757%-128 - C3 -2HMV 5.5 KTRA_BACSU
7 PsiBlast_PDB 77.0157%-129 - C3 -2HMU Error KTRA_BACSU
32 PsiBlast_CBE 76.9657%-130 - C3 -2HMW 5.6 KTRA_BACSU
34 PsiBlast_CBE 76.6257%-132 - C3 -2HMU 5.6 KTRA_BACSU
9 PsiBlast_PDB 76.5957%-132 - C3 -2HMW Error KTRA_BACSU
57 HHSearch 76.5057%-125 - C3 -2HMT 5.5 KTRA_BACSU
38 PsiBlast_CBE 76.1757%-124 - C3 -2HMS 5.9 KTRA_BACSU
33 PsiBlast_CBE 76.1357%-134 - C3 -2HMV 4.9 KTRA_BACSU
6 PsiBlast_PDB 76.0057%-127 - C3 -2HMT 5.5 KTRA_BACSU
36 PsiBlast_CBE 75.7757%-125 - C3 -2HMS 6.5 KTRA_BACSU
39 PsiBlast_CBE 75.1657%-126 - C3 -1LSU 6.9 KTRA_BACSU
68 Fugue 74.7457%-128 - C3 -1LSU Error KTRA_BACSU
10 PsiBlast_PDB 74.7457%-128 - C3 -1LSU Error KTRA_BACSU