@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0946: (2016-03-20 )
MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQHSENLGVIAESVSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFGKRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMAKSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_8(2YQU)
?
[Raw transfer]



FAD_B_6(2EQ7)
?
[Raw transfer]



FAD_A_3(3URH)
?
[Raw transfer]



FAD_B_4(2EQ6)
?
[Raw transfer]



FAD_A_3(3URH)
?
[Raw transfer]



FAD_A_4(2EQ7)
?
[Raw transfer]



FAD_B_5(1EBD)
DLDH1_GEOSE
[Raw transfer]



FAD_A_7(2YQU)
?
[Raw transfer]



FAD_A_4(1EBD)
DLDH1_GEOSE
[Raw transfer]



FAD_B_4(1LPF)
DLDH_PSEFL
[Raw transfer]



FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_A_3(2EQ6)
?
[Raw transfer]



FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_A_3(2EQ6)
?
[Raw transfer]



FAD_A_7(2YQU)
?
[Raw transfer]



FAD_A_4(1EBD)
DLDH1_GEOSE
[Raw transfer]



FAD_A_3(1LPF)
DLDH_PSEFL
[Raw transfer]



FAD_C_3(1LVL)
DLDH1_PSEPU
[Raw transfer]



FAD_B_4(3LAD)
DLDH_AZOVI
[Raw transfer]



FAD_A_3(4JDR)
DLDH_ECOLI
[Raw transfer]



FAD_D_4(1JEH)
DLDH_YEAST
[Raw transfer]



FAD_A_3(3II4)
DLDH_MYCTU
[Raw transfer]



FAD_A_4(1V59)
DLDH_YEAST
[Raw transfer]



FAD_C_3(1LVL)
DLDH1_PSEPU
[Raw transfer]



FAD_B_11(4JDR)
DLDH_ECOLI
[Raw transfer]



FAD_C_3(1OJT)
?
[Raw transfer]



FAD_A_3(2A8X)
DLDH_MYCTU
[Raw transfer]



FAD_B_5(3II4)
DLDH_MYCTU
[Raw transfer]



FAD_C_3(1JEH)
DLDH_YEAST
[Raw transfer]



FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]



FAD_B_5(1V59)
DLDH_YEAST
[Raw transfer]



FAD_A_5(4K8D)
MERA_PSEAI
[Raw transfer]



FAD_A_4(1V59)
DLDH_YEAST
[Raw transfer]



FAD_A_2(4YWO)
?
[Raw transfer]



FAD_C_3(1BHY)
?
[Raw transfer]



FAD_C_3(1OJT)
?
[Raw transfer]



FAD_B_4(2QAE)
DLDH_TRYCR
[Raw transfer]



FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]
122 HHSearch 97.8273% -95 - C1 -1EBD 12.8 DLDH1_GEOSE
1 PsiBlast_PDB 97.8273% -95 - C1 -1EBD - DLDH1_GEOSE -
21 PsiBlast_CBE 96.1373% -94 - C1 -1EBD 12.6 DLDH1_GEOSE
5 PsiBlast_PDB 87.1644% -85 - C1 -3URH 12.5 ?
134 Fugue 86.1066% -89 - C1 -1EBD 12.8 DLDH1_GEOSE
115 HHSearch 83.9644% -81 - C1 -3URH 12.5 ?
81 PsiBlast_CBE 82.4339% -79 - C1 -1V59 12.4 DLDH_YEAST
80 PsiBlast_CBE 82.1339% -79 - C1 -1V59 12.6 DLDH_YEAST
129 HHSearch 81.9842% -84 - C1 -2YQU 12.7 ?
18 PsiBlast_PDB 81.8542% -84 - C1 -2YQU 12.7 ?
121 HHSearch 81.4540% -78 - C1 -1V59 12.4 DLDH_YEAST
22 PsiBlast_CBE 81.4544% -86 - C1 -4JQ9 - ? -
77 PsiBlast_CBE 81.2842% -82 - C1 -2YQU 12.6 ?
54 PsiBlast_CBE 81.2742% -80 - C1 -1ZMC - DLDH_HUMAN -
118 HHSearch 81.1443% -83 - C1 -1ZMD - DLDH_HUMAN -
55 PsiBlast_CBE 80.9742% -78 - C1 -3RNM - DLDH_HUMAN -
53 PsiBlast_CBE 80.8242% -80 - C1 -1ZMC - DLDH_HUMAN -
13 PsiBlast_PDB 80.8244% -82 - C1 -2EQ8 - ? -
44 PsiBlast_CBE 80.7942% -80 - C1 -1ZMD - DLDH_HUMAN -
46 PsiBlast_CBE 80.7742% -80 - C1 -1ZMD - DLDH_HUMAN -
82 PsiBlast_CBE 80.4839% -77 - C1 -1JEH 13.0 DLDH_YEAST
27 PsiBlast_CBE 80.4644% -85 - C1 -4JDR 12.6 DLDH_ECOLI
78 PsiBlast_CBE 80.1142% -83 - C1 -2EQ7 12.8 ?
2 PsiBlast_PDB 80.0644% -85 - C1 -4JDR 12.5 DLDH_ECOLI
17 PsiBlast_PDB 79.8942% -83 - C1 -2EQ7 12.9 ?
12 PsiBlast_PDB 79.4744% -81 - C1 -2EQ6 13.2 ?
75 PsiBlast_CBE 79.1844% -81 - C1 -2EQ6 13.2 ?
20 PsiBlast_PDB 79.1139% -76 - C1 -1JEH 12.7 DLDH_YEAST
4 PsiBlast_PDB 78.6642% -81 - C1 -3LAD 12.2 DLDH_AZOVI
117 HHSearch 78.6344% -81 - C1 -2EQ6 13.2 ?
113 HHSearch 78.5742% -76 - C1 -1OJT 10.4 ?
15 PsiBlast_PDB 78.4141% -78 - C1 -1LPF 12.1 DLDH_PSEFL
28 PsiBlast_CBE 77.8842% -79 - C1 -3LAD 12.9 DLDH_AZOVI
116 HHSearch 77.3142% -79 - C1 -3LAD 12.2 DLDH_AZOVI
114 HHSearch 77.1243% -79 * C1 *2QAE 12.4 DLDH_TRYCR
112 HHSearch 76.6340% -84 - C1 -1LVL 11.8 DLDH1_PSEPU
76 PsiBlast_CBE 76.0541% -78 - C1 -1LPF 12.5 DLDH_PSEFL
16 PsiBlast_PDB 75.8640% -80 - C1 -1LVL 11.8 DLDH1_PSEPU
89 PsiBlast_CBE 74.4736% -83 - C1 -3II4 12.5 DLDH_MYCTU
83 PsiBlast_CBE 74.1642% -75 - C1 -1OJT 9.1 ?
84 PsiBlast_CBE 73.7342% -75 - C1 -1BHY 9.2 ?
123 HHSearch 73.3336% -79 - C1 -2A8X 11.1 DLDH_MYCTU
79 PsiBlast_CBE 72.8943% -75 - C1 -2QAE 11.1 DLDH_TRYCR
90 PsiBlast_CBE 72.3736% -80 - C1 -3II4 11.1 DLDH_MYCTU
19 PsiBlast_PDB 71.6443% -75 - C1 -2QAE 11.2 DLDH_TRYCR
91 PsiBlast_CBE 68.4334% -76 - C1 -4K8D 11.9 MERA_PSEAI
94 PsiBlast_CBE 65.4232% -74 - C1 -4YWO 9.7 ?