@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0963: (2016-03-20 )
MKQIKKLLVANRGEIAIRIFRAAAELDISTVAIYSNEDKSSLHRYKADESYLVGSDLGPAESYLNIERIIDVAKQANVDAIHPGYGFLSENEQFARRCAEEGIKFIGPHLEHLDMFGDKVKARTTAIKADLPVIPGTDGPIKSYELAKEFAEEAGFPLMIKATSGGGGKGMRIVREESELEDAFHRAKSEAEKSFGNSEVYIERYIDNPKHIEVQVIGDEHGNIVHLFERDCSVQRRHQKVVEVAPSVGLSPTLRQRICDAAIQLMENIKYVNAGTVEFLVSGDEFFFIEVNPRVQVEHTITEMVTGIDIVKTQILVAAGADLFGEEINMPQQKDITTLGYAIQCRITTEDPLNDFMPDTGTIIAYRSSGGFGVRLDAGDGFQGAEISPYYDSLLVKLSTHAISFKQAEEKMVRSLREMRIRGVKTNIPFLINVMKNKKFTSGDYTTKFIEETPELFDIQPSLDRGTKTLEYIGNVTINGFPNVEKRPKPDYELASIPTVSSSKIASFSGTKQLLDEVGPKGVAEWVKKQDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQPSANSLYYALNGFPRHLRTDIEGMESLSHYWSTVRTYYSDFESDIKSPNTEIYQHEMPGGQYSNLSQQAKSLGLGERFDEVKDMYRRVNFLFGDIVKVTPSSKVVGDMALYMVQNDLDEQSVITDGYKLDFPESVVSFFKGEIGQPVNGFNKDLQAVILKGQEALTARPGEYLEPVDFEKVRELLEEEQQGPVTEQDIISYVLYPKVYEQYIQTRNQYGNLSLLDTPTFFFGMRNGETVEIEIDKGKRLIIKLETISEPDENGNRTIYYAMNGQARRIYIKDENVHTNANVKPKADKSNPSHIGAQMPGSVTEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIEKATD

Atome Classification :

(63 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




OA5_A_3(2W6Q)
ACCC_ECOLI
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




L21_A_3(2W6Z)
ACCC_ECOLI
[Raw transfer]




OA5_B_5(2W6Q)
ACCC_ECOLI
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




OA1_B_5(2W6M)
ACCC_ECOLI
[Raw transfer]




OA1_A_3(2W6M)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]




OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]




OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]




25 PsiBlast_CBE 91.85100% -91 - C2 -3HO8 - ? -
2 PsiBlast_PDB 90.90100% -88 - C2 -3HO8 - ? -
36 PsiBlast_CBE 90.7799% -92 - C2 -3HB9 - ? -
26 PsiBlast_CBE 90.77100% -91 - C2 -3HO8 - ? -
30 PsiBlast_CBE 90.7499% -91 - C2 -4HNT - ? -
32 PsiBlast_CBE 90.2199% -89 - C2 -4HNT - ? -
29 PsiBlast_CBE 89.9399% -90 - C2 -4HNU - ? -
27 PsiBlast_CBE 89.3799% -90 - C2 -4HNU - ? -
1 PsiBlast_PDB 86.39100% -90 - C2 -3BG5 - ? -
117 HHSearch 85.93100% -90 - C2 -3HBL - ? -
7 PsiBlast_PDB 85.7299% -90 - C2 -3HBL - ? -
24 PsiBlast_CBE 85.50100% -86 - C2 -3HO8 - ? -
6 PsiBlast_PDB 85.2799% -90 - C2 -3HB9 - ? -
5 PsiBlast_PDB 84.9199% -89 - C2 -4HNV - ? -
41 PsiBlast_CBE 84.6699% -89 - C2 -3HBL - ? -
37 PsiBlast_CBE 84.5399% -92 - C2 -3HB9 - ? -
23 PsiBlast_CBE 84.45100% -90 - C2 -3BG5 - ? -
22 PsiBlast_CBE 84.42100% -86 - C2 -3BG5 - ? -
40 PsiBlast_CBE 84.2999% -89 - C2 -3HBL - ? -
31 PsiBlast_CBE 84.2599% -86 - C2 -4HNT - ? -
131 HHSearch 59.4945% -76 - C2 -3OUZ 7.3 ?
50 PsiBlast_CBE 59.4143% -74 - C2 -3JZF 9.6 ACCC_ECOLI
49 PsiBlast_CBE 59.4043% -74 - C2 -3JZI 9.3 ACCC_ECOLI
60 PsiBlast_CBE 59.2843% -76 - C2 -2W6Z 4.8 ACCC_ECOLI
71 PsiBlast_CBE 59.2043% -79 - C2 -2VR1 4.6 ACCC_ECOLI
63 PsiBlast_CBE 59.0943% -76 - C2 -2W6P 5.2 ACCC_ECOLI
83 PsiBlast_CBE 59.0643% -75 - C2 -3G8C 6.3 ACCC_ECOLI
75 PsiBlast_CBE 59.0343% -75 - C2 -2V59 4.7 ACCC_ECOLI
90 PsiBlast_CBE 58.9343% -77 - C2 -3G8D 5.5 ACCC_ECOLI
67 PsiBlast_CBE 58.7843% -76 - C2 -2W6N 5.3 ACCC_ECOLI
65 PsiBlast_CBE 58.7043% -77 - C2 -2W6O 3.9 ACCC_ECOLI
62 PsiBlast_CBE 58.6743% -76 - C2 -2W6Q 4.5 ACCC_ECOLI
55 PsiBlast_CBE 58.6743% -77 - C2 -2W71 6.8 ACCC_ECOLI
81 PsiBlast_CBE 58.6043% -77 - C2 -3RUP 6.8 ACCC_ECOLI
56 PsiBlast_CBE 58.5643% -77 - C2 -2W71 6.2 ACCC_ECOLI
69 PsiBlast_CBE 58.5543% -75 - C2 -2W6M 3.9 ACCC_ECOLI
58 PsiBlast_CBE 58.4643% -77 - C2 -2W70 4.7 ACCC_ECOLI
73 PsiBlast_CBE 58.4443% -75 - C2 -2V5A 6.3 ACCC_ECOLI
92 PsiBlast_CBE 58.4143% -78 - C2 -3RV4 7.4 ACCC_ECOLI
66 PsiBlast_CBE 58.4043% -75 - C2 -2W6N 5.4 ACCC_ECOLI
76 PsiBlast_CBE 58.3043% -74 - C2 -2V58 5.9 ACCC_ECOLI
77 PsiBlast_CBE 58.1843% -74 - C2 -2V58 5.6 ACCC_ECOLI
127 HHSearch 58.1647% -72 - C2 -2VPQ 6.8 ?
20 PsiBlast_PDB 58.1543% -77 - C2 -2J9G 6.0 ACCC_ECOLI
61 PsiBlast_CBE 58.1343% -77 - C2 -2W6Q 4.8 ACCC_ECOLI
68 PsiBlast_CBE 58.1043% -77 - C2 -2W6M 4.0 ACCC_ECOLI
57 PsiBlast_CBE 58.0443% -75 - C2 -2W70 3.7 ACCC_ECOLI
17 PsiBlast_PDB 58.0043% -74 - C2 -3JZI 8.6 ACCC_ECOLI
80 PsiBlast_CBE 57.8143% -76 - C2 -3RV3 8.2 ACCC_ECOLI
82 PsiBlast_CBE 57.7843% -72 - C2 -3RUP 8.3 ACCC_ECOLI
84 PsiBlast_CBE 57.6143% -74 - C2 -3G8C 6.4 ACCC_ECOLI
85 PsiBlast_CBE 57.6043% -73 - C2 -2VQD 7.3 ACCC_PSEAE
74 PsiBlast_CBE 57.6043% -75 - C2 -2V59 5.5 ACCC_ECOLI
89 PsiBlast_CBE 57.5343% -76 - C2 -1DV2 5.8 ACCC_ECOLI
88 PsiBlast_CBE 57.5143% -75 - C2 -1DV2 4.6 ACCC_ECOLI
64 PsiBlast_CBE 57.5143% -79 - C2 -2W6O 3.8 ACCC_ECOLI
48 PsiBlast_CBE 57.4445% -72 - C2 -2VPQ 6.2 ?
14 PsiBlast_PDB 56.9645% -71 - C2 -2VPQ 7.0 ?
79 PsiBlast_CBE 56.7943% -77 - C2 -3RV3 6.3 ACCC_ECOLI
15 PsiBlast_PDB 56.4745% -78 - C2 -4RZQ 3.0 ACCC_HAEIN
78 PsiBlast_CBE 55.9043% -78 - C2 -2J9G 7.4 ACCC_ECOLI
101 PsiBlast_CBE 50.8837% -68 - C2 -3VA7 2.1 ?
126 HHSearch 50.7137% -64 * C2 *3VA7 2.1 ?