@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0982: (2016-03-20 )
MRMKRFLTIVQILLVVIIIIFGYKIVQTYIEDKQERANYEKLQQKFQMLMSKHQEHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDNKYGKYQLQVFSAYKTTTKDNYIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDKIMTLSTCEDAYSETTKRIVVVAKIIKVS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

E64_A_2(1QX6)
?
[Raw transfer]



CHAIN_H_8(4LFD)
?
[Raw transfer]
-
ETM_A_3(1QXA)
?
[Raw transfer]



ETM_A_7(1QWZ)
?
[Raw transfer]



ETM_A_7(1QWZ)
?
[Raw transfer]



EDO_B_19(3PSQ)
?
[Raw transfer]



ACY_A_8(3PSQ)
?
[Raw transfer]



ACY_A_8(3PSQ)
?
[Raw transfer]



CHAIN_B_2(1QXA)
?
[Raw transfer]
-
CHAIN_G_6(4LFD)
?
[Raw transfer]
-
CHAIN_F_4(4LFD)
?
[Raw transfer]
-
CHAIN_E_2(4LFD)
?
[Raw transfer]
-
21 HHSearch 98.8498% -88 - C2 -1QWZ 2.6 ?
3 PsiBlast_PDB 98.6698% -89 - C2 -1QWZ 2.6 ?
5 PsiBlast_PDB 97.8296% -86 - C2 -1QX6 3.0 ?
16 PsiBlast_CBE 97.6599% -88 - C2 -4LFD 3.8 ?
18 PsiBlast_CBE 97.5799% -90 - C2 -4LFD 2.9 ?
1 PsiBlast_PDB 97.3799% -90 - C2 -4LFD 3.7 ?
4 PsiBlast_PDB 97.2698% -83 - C2 -1QXA 2.3 ?
17 PsiBlast_CBE 97.1299% -90 - C2 -4LFD 3.3 ?
38 Fugue 96.3899% -89 - C2 -1NG5 - ? -
2 PsiBlast_PDB 96.3899% -89 - C2 -1NG5 - ? -
6 PsiBlast_PDB 73.9340% -64 - C2 -1RZ2 - ? -
19 PsiBlast_CBE 66.7833% -77 - C2 -3PSQ 2.2 ?
20 PsiBlast_CBE 66.1035% -83 - C2 -4UX7 - ? -
8 PsiBlast_PDB 65.2935% -83 - C2 -4UX7 - ? -
22 HHSearch 64.8832% -59 - C2 -3PSQ 3.8 ?
7 PsiBlast_PDB 64.7333% -54 - C2 -3PSQ 3.8 ?
9 PsiBlast_PDB 63.4130% -67 - C2 -4Y4Q - ? -
26 HHSearch 53.8422% -71 - C2 -2KW8 - ? -
27 HHSearch 49.9822% -70 - C2 -3FN5 - ? -
30 HHSearch 48.9816% -78 - C2 -2W1J - ? -