@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0983: (2016-03-20 )
MKFMAENRLTLTKGTAKDIIERFYTRHGIETLEGFDGMFVTQTLEQEDFDEVKILTVWKSKQAFTDWLKSDVFKAAHKHVRSKNEDESSPIINNKVITYDIGYSYMK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_5(2ZDO)
HDOX1_STAAN
[Raw transfer]



HEM_D_8(2ZDO)
HDOX1_STAAN
[Raw transfer]



HEM_B_5(3LGN)
HDOX2_STAAN
[Raw transfer]



COH_A_5(2ZDP)
HDOX2_STAAN
[Raw transfer]



HEM_C_7(2ZDO)
HDOX1_STAAN
[Raw transfer]



HEM_B_6(2ZDO)
HDOX1_STAAN
[Raw transfer]



HEM_B_4(3LGM)
HDOX2_STAAN
[Raw transfer]



COH_B_6(2ZDP)
HDOX2_STAAN
[Raw transfer]



HEM_A_3(3QGP)
HDOX2_STAAN
[Raw transfer]



HEM_B_5(3QGP)
HDOX2_STAAN
[Raw transfer]



HEM_A_3(4FNI)
HDOX2_STAAN
[Raw transfer]



HEM_A_3(3LGN)
HDOX2_STAAN
[Raw transfer]



HEM_B_5(4FNI)
HDOX2_STAAN
[Raw transfer]



HEM_A_3(3LGM)
HDOX2_STAAN
[Raw transfer]



HEM_B_4(4FNH)
HDOX2_STAAN
[Raw transfer]



HEM_A_3(4FNH)
HDOX2_STAAN
[Raw transfer]
23 PsiBlast_CBE 98.0799% -95 - C5 -2ZDO 12.4 HDOX1_STAAN
21 PsiBlast_CBE 97.2499% -95 - C5 -2ZDO 12.6 HDOX1_STAAN
1 PsiBlast_PDB 97.1499% -92 - C5 -2ZDO 12.8 HDOX1_STAAN
22 PsiBlast_CBE 95.7099% -93 - C5 -2ZDO 12.4 HDOX1_STAAN
24 PsiBlast_CBE 86.3664% -90 - C5 -3QGP 13.0 HDOX2_STAAN
5 PsiBlast_PDB 86.3064% -93 - C5 -3QGP 12.6 HDOX2_STAAN
2 PsiBlast_PDB 86.0964% -89 - C5 -2ZDP 12.6 HDOX2_STAAN
4 PsiBlast_PDB 86.0364% -88 - C5 -3LGN 12.9 HDOX2_STAAN
3 PsiBlast_PDB 85.9264% -91 - C5 -3LGM 12.9 HDOX2_STAAN
25 PsiBlast_CBE 85.7664% -87 - C5 -3LGN 13.1 HDOX2_STAAN
28 PsiBlast_CBE 85.7263% -86 - C5 -4FNI 13.0 HDOX2_STAAN
29 PsiBlast_CBE 85.3363% -89 - C5 -4FNH 11.7 HDOX2_STAAN
26 PsiBlast_CBE 85.1964% -82 - C5 -3LGM 12.9 HDOX2_STAAN
8 PsiBlast_PDB 85.0763% -89 - C5 -4FNI 12.9 HDOX2_STAAN
27 PsiBlast_CBE 85.0564% -90 - C5 -2ZDP 12.7 HDOX2_STAAN
7 PsiBlast_PDB 84.7963% -92 - C5 -4FNH 12.6 HDOX2_STAAN
6 PsiBlast_PDB 83.3464%-103 - C5 -1SQE - HDOX2_STAAM -
9 PsiBlast_PDB 65.0834% -87 - C5 -4OZ5 - ? -
10 PsiBlast_PDB 64.4335% -96 - C5 -4JOU - ? -
35 HHSearch 61.3221% -63 - C5 -1IUJ - ? -