@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1043: (2016-03-21 )
MNHLLSMEHLSTDQIYKLIQKASQFKSGERQLPNFEGKYVANLFFENSTRTKCSFEMAELKLGLKTISFETSTSSVSKGESLYDTCKTLESIGCDLLVIRHPFNNYYEKLANINIPIANAGDGSGQHPTQSLLDLMTIYEEYGYFEGLNVLICGDIKNSRVARSNYHSLKALGANVMFNSPNAWIDDSLEAPYVNIDDVIETVDIVMLLRIQHERHGLAEETRFAADDYHQKHGLNEVRYNKLQEHAIVMHPAPVNRGVEIQSDLVEASKSRIFKQMENGVYLRMAVIDELLK

Atome Classification :

(52 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6PR_A_8(2H3E)
PYRB_ECOLI
[Raw transfer]




PAL_D_4(1ML4)
PYRB_PYRAB
[Raw transfer]




PAL_D_4(1ML4)
PYRB_PYRAB
[Raw transfer]




PAL_C_8(4KGV)
?
[Raw transfer]




PAL_A_5(4KGX)
?
[Raw transfer]




PAL_C_8(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_A_6(1EKX)
PYRB_ECOLI
[Raw transfer]




6PR_C_7(2H3E)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4F04)
PYRB_ECOLI
[Raw transfer]




PAL_A_5(4KGV)
?
[Raw transfer]




PAL_C_10(4KH0)
?
[Raw transfer]




PAL_C_8(4KGX)
?
[Raw transfer]




PAL_A_5(4KH1)
?
[Raw transfer]




PAL_C_11(4KH1)
?
[Raw transfer]




PAL_A_5(4KH0)
?
[Raw transfer]




PAL_B_7(1EKX)
PYRB_ECOLI
[Raw transfer]




PAL_C_8(4F04)
PYRB_ECOLI
[Raw transfer]




PAL_B_5(4BJH)
PYRB_AQUAE
[Raw transfer]




1IP_C_9(2IPO)
PYRB_ECOLI
[Raw transfer]




1IP_A_7(2IPO)
PYRB_ECOLI
[Raw transfer]




CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]




CP_A_4(3R7F)
PYRB_BACSU
[Raw transfer]




CP_C_16(3R7F)
PYRB_BACSU
[Raw transfer]




EOP_A_7(2FZC)
PYRB_ECOLI
[Raw transfer]




CP_B_11(3R7F)
PYRB_BACSU
[Raw transfer]




PCT_C_10(2HSE)
PYRB_ECOLI
[Raw transfer]




EOB_C_10(2FZG)
PYRB_ECOLI
[Raw transfer]




EOB_A_9(2FZG)
PYRB_ECOLI
[Raw transfer]




PCT_A_6(2HSE)
PYRB_ECOLI
[Raw transfer]




EOZ_C_8(2FZK)
PYRB_ECOLI
[Raw transfer]




EOP_C_8(2FZC)
PYRB_ECOLI
[Raw transfer]




PCT_A_7(2A0F)
PYRB_ECOLI
[Raw transfer]




EOZ_A_7(2FZK)
PYRB_ECOLI
[Raw transfer]




AL0_G_9(2AIR)
PYRB_ECOLI
[Raw transfer]




FLC_B_5(3D6N)
PYRB_AQUAE
[Raw transfer]




NCD_A_9(1R0C)
PYRB_ECOLI
[Raw transfer]




ASP_A_7(2HSE)
PYRB_ECOLI
[Raw transfer]




AL0_A_10(2AIR)
PYRB_ECOLI
[Raw transfer]




NCD_G_10(1R0C)
PYRB_ECOLI
[Raw transfer]




CP_C_13(1ZA2)
PYRB_ECOLI
[Raw transfer]




CP_A_12(1ZA2)
PYRB_ECOLI
[Raw transfer]




26 PsiBlast_CBE 96.6455%-103 - C6 -3R7F 4.3 PYRB_BACSU
1 PsiBlast_PDB 96.5955%-106 - C6 -3R7D - PYRB_BACSU -
101 HHSearch 96.4457%-105 - C6 -3R7F 4.5 PYRB_BACSU
27 PsiBlast_CBE 96.2255%-107 - C6 -3R7F 3.5 PYRB_BACSU
2 PsiBlast_PDB 95.8655%-104 - C6 -3R7F 4.5 PYRB_BACSU
28 PsiBlast_CBE 95.3555%-105 - C6 -3R7D - PYRB_BACSU -
29 PsiBlast_CBE 95.1155%-105 - C6 -3R7D - PYRB_BACSU -
22 PsiBlast_CBE 94.5655% -99 - C6 -3R7L - PYRB_BACSU -
23 PsiBlast_CBE 94.1855%-101 - C6 -3R7L - PYRB_BACSU -
25 PsiBlast_CBE 94.1055% -99 - C6 -3R7L - PYRB_BACSU -
3 PsiBlast_PDB 93.5255%-100 - C6 -3R7L - PYRB_BACSU -
21 PsiBlast_CBE 93.4755% -99 - C6 -3R7L - PYRB_BACSU -
24 PsiBlast_CBE 93.1655% -99 - C6 -3R7L - PYRB_BACSU -
5 PsiBlast_PDB 81.4338% -94 - C6 -3D6N 2.6 PYRB_AQUAE
7 PsiBlast_PDB 81.3236% -99 - C6 -1ML4 7.9 PYRB_PYRAB
105 HHSearch 80.2036% -93 - C6 -1ML4 7.9 PYRB_PYRAB
6 PsiBlast_PDB 79.9638% -94 - C6 -4BJH 5.3 PYRB_AQUAE
30 PsiBlast_CBE 79.4534% -97 - C6 -2BE7 - ? -
122 Fugue 79.3234%-104 - C6 -3CSU - PYRB_ECOLI -
50 PsiBlast_CBE 79.1233%-102 - C6 -2RGW - PYRB_METJA -
74 PsiBlast_CBE 76.5033% -83 - C6 -2FZG 2.9 PYRB_ECOLI
81 PsiBlast_CBE 76.0433% -79 - C6 -1ZA2 2.8 PYRB_ECOLI
62 PsiBlast_CBE 75.6833% -75 - C6 -4KGV 7.9 ?
55 PsiBlast_CBE 75.5633% -77 - C6 -4KH0 8.0 ?
72 PsiBlast_CBE 75.4133% -79 - C6 -2FZK 2.3 PYRB_ECOLI
77 PsiBlast_CBE 75.2633% -76 - C6 -2FZC 3.3 PYRB_ECOLI
75 PsiBlast_CBE 75.2133% -74 - C6 -2FZG 5.1 PYRB_ECOLI
76 PsiBlast_CBE 75.1933% -79 - C6 -2FZC 2.2 PYRB_ECOLI
96 PsiBlast_CBE 74.9433% -75 - C6 -1EKX 7.7 PYRB_ECOLI
60 PsiBlast_CBE 74.9233% -74 - C6 -4KGX 8.0 ?
80 PsiBlast_CBE 74.8633% -80 - C6 -1ZA2 2.9 PYRB_ECOLI
79 PsiBlast_CBE 74.8033% -82 - C6 -2AIR 3.1 PYRB_ECOLI
98 PsiBlast_CBE 74.7633% -78 - C6 -1EKX 7.6 PYRB_ECOLI
69 PsiBlast_CBE 74.6433% -76 * C6 *2IPO 6.1 PYRB_ECOLI
54 PsiBlast_CBE 74.6133% -73 - C6 -4KH1 8.1 ?
65 PsiBlast_CBE 74.6033% -76 - C6 -4F04 8.0 PYRB_ECOLI
82 PsiBlast_CBE 74.5633% -82 - C6 -1R0C 3.6 PYRB_ECOLI
71 PsiBlast_CBE 74.5533% -75 - C6 -2H3E 7.3 PYRB_ECOLI
83 PsiBlast_CBE 74.5333% -79 - C6 -1R0C 3.6 PYRB_ECOLI
53 PsiBlast_CBE 74.5133% -77 - C6 -4KH1 7.9 ?
97 PsiBlast_CBE 74.4533% -80 - C6 -1EKX 7.5 PYRB_ECOLI
61 PsiBlast_CBE 74.4233% -74 - C6 -4KGV 8.0 ?
59 PsiBlast_CBE 74.3133% -73 - C6 -4KGX 7.9 ?
78 PsiBlast_CBE 74.1333% -81 - C6 -2AIR 2.9 PYRB_ECOLI
56 PsiBlast_CBE 74.1233% -75 - C6 -4KH0 8.0 ?
64 PsiBlast_CBE 74.1133% -78 - C6 -4F04 7.8 PYRB_ECOLI
70 PsiBlast_CBE 73.7533% -74 - C6 -2H3E 7.3 PYRB_ECOLI
68 PsiBlast_CBE 73.7533% -77 - C6 -2IPO 6.5 PYRB_ECOLI
73 PsiBlast_CBE 73.3933% -77 - C6 -2FZK 3.8 PYRB_ECOLI
52 PsiBlast_CBE 72.0933% -73 - C6 -2HSE 3.2 PYRB_ECOLI
14 PsiBlast_PDB 71.5233% -71 - C6 -2HSE 3.6 PYRB_ECOLI
13 PsiBlast_PDB 69.4933% -67 - C6 -2A0F 2.9 PYRB_ECOLI