@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1044: (2016-03-21 )
MKLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVHLREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVKEGAFAFTDDGVGVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPHARDEKAQPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCETFNLEYGTLKENGYADLTIIDLDSEQEIKGEDFLSKADNTPFIGYKVYGNPILTMVEGEVKFEGDK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DOR_A_4(4BJH)
PYRC_AQUAE
[Raw transfer]



FLC_A_4(3D6N)
PYRC_AQUAE
[Raw transfer]
79 HHSearch 99.87100% -84 - C1 -3GRI - PYRC_STAAW -
1 PsiBlast_PDB 99.0798% -84 - C1 -3GRI - PYRC_STAAW -
83 HHSearch 87.4962% -75 - C1 -3MPG - PYRC_BACAN -
2 PsiBlast_PDB 86.4062% -76 - C1 -3MPG - PYRC_BACAN -
21 PsiBlast_CBE 86.3762% -76 - C1 -3MPG - PYRC_BACAN -
5 PsiBlast_PDB 79.1541% -71 - C1 -3D6N 2.5 PYRC_AQUAE
6 PsiBlast_PDB 78.6641% -69 - C1 -4BJH 3.2 PYRC_AQUAE
85 HHSearch 78.4341% -61 - C1 -2Z00 - ? -
7 PsiBlast_PDB 78.3140% -61 - C1 -2Z00 - ? -
92 HHSearch 75.3642% -80 - C1 -1XRT - PYRC_AQUAE -
16 PsiBlast_PDB 74.7924% -73 - C1 -4B3Z - DPYL1_HUMAN -
3 PsiBlast_PDB 74.6041% -83 - C1 -1XRF - PYRC_AQUAE -
4 PsiBlast_PDB 74.5541% -80 - C1 -1XRT - PYRC_AQUAE -
9 PsiBlast_PDB 74.5127% -59 * C1 *4TQT - ? -
113 Fugue 74.4329% -60 - C1 -4TQT - ? -
22 PsiBlast_CBE 74.2241% -82 - C1 -1XRT - PYRC_AQUAE -
93 HHSearch 72.9924% -63 - C1 -2VM8 - DPYL2_HUMAN -
17 PsiBlast_PDB 72.7424% -71 - C1 -1KCX - DPYL1_MOUSE -
15 PsiBlast_PDB 72.6425% -70 - C1 -4GZ7 - ? -
20 PsiBlast_PDB 71.8425% -71 - C1 -4B90 - DPYL5_HUMAN -