@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1074: (2016-03-21 )
MKMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_8(4I08)
FABG_VIBCH
[Raw transfer]




NAP_D_7(4JRO)
?
[Raw transfer]




NDP_A_3(3SJ7)
?
[Raw transfer]




NAP_A_8(3RSH)
FABG_VIBCH
[Raw transfer]




NAP_B_19(3RSH)
FABG_VIBCH
[Raw transfer]




NAP_B_5(4JRO)
?
[Raw transfer]




NAP_C_6(4JRO)
?
[Raw transfer]




NDP_B_16(4I08)
FABG_VIBCH
[Raw transfer]




NDP_B_6(3SJ7)
?
[Raw transfer]




NAP_C_15(1Q7B)
FABG_ECOLI
[Raw transfer]




NAP_D_16(1Q7B)
FABG_ECOLI
[Raw transfer]




NAP_B_14(1Q7B)
FABG_ECOLI
[Raw transfer]




NAP_E_5(1EDO)
FABG1_BRANA
[Raw transfer]




NAP_A_13(1Q7B)
FABG_ECOLI
[Raw transfer]




NAP_A_5(3ICC)
?
[Raw transfer]




NAP_D_8(4DMM)
?
[Raw transfer]




NAP_C_7(4DMM)
?
[Raw transfer]




NDP_D_8(4WK6)
?
[Raw transfer]




NDP_B_6(4WK6)
?
[Raw transfer]




NAP_A_5(3TZC)
?
[Raw transfer]




NDP_C_7(4WK6)
?
[Raw transfer]




GOL_A_3(3GED)
?
[Raw transfer]




1PE_B_5(2PNF)
FABG_AQUAE
[Raw transfer]




NAP_E_5(1Q7C)
FABG_ECOLI
[Raw transfer]




1PE_A_6(2PNF)
FABG_AQUAE
[Raw transfer]




EDO_A_10(3RRO)
FABG_VIBCH
[Raw transfer]




NDP_A_5(4WK6)
?
[Raw transfer]




NAP_G_7(1Q7C)
FABG_ECOLI
[Raw transfer]




PEG_B_17(3OSU)
FABG_STAAM
[Raw transfer]




EDO_A_7(4I08)
FABG_VIBCH
[Raw transfer]




PGE_A_8(3RRO)
FABG_VIBCH
[Raw transfer]




PGE_B_24(3RRO)
FABG_VIBCH
[Raw transfer]




2 PsiBlast_PDB 95.0196% -85 - C1 -3OSU 2.1 FABG_STAAM
21 PsiBlast_CBE 93.63100% -85 - C1 -3SJ7 11.8 ?
1 PsiBlast_PDB 92.65100% -83 - C1 -3SJ7 10.9 ?
23 PsiBlast_CBE 83.6162% -83 - C1 -4JRO 10.8 ?
4 PsiBlast_PDB 82.5562% -82 - C1 -4JRO - ? -
3 PsiBlast_PDB 80.7364% -82 - C1 -2UVD - ? -
22 PsiBlast_CBE 79.2962% -78 - C1 -4JRO 8.4 ?
30 PsiBlast_CBE 79.2355% -81 - C1 -1Q7B 8.0 FABG_ECOLI
31 PsiBlast_CBE 78.3655% -84 - C1 -1Q7B 8.8 FABG_ECOLI
5 PsiBlast_PDB 77.9660% -90 - C1 -4RZH - ? -
13 PsiBlast_PDB 77.8254% -81 - C1 -1Q7C 4.8 FABG_ECOLI
9 PsiBlast_PDB 77.6655% -81 - C1 -1Q7B 8.8 FABG_ECOLI
19 PsiBlast_PDB 77.5559% -71 - C1 -4DMM - ? -
44 PsiBlast_CBE 77.4554% -84 - C1 -3TZH - ? -
18 PsiBlast_PDB 77.3259% -84 - C1 -4DML - ? -
16 PsiBlast_PDB 77.2354% -84 - C1 -3TZK - ? -
51 PsiBlast_CBE 76.8250% -78 * C1 *2PNF 1.8 FABG_AQUAE
36 PsiBlast_CBE 76.7354% -80 - C1 -1Q7C 4.8 FABG_ECOLI
49 PsiBlast_CBE 76.6654% -84 - C1 -3TZH - ? -
24 PsiBlast_CBE 76.5962% -80 - C1 -4JRO 9.4 ?
42 PsiBlast_CBE 76.5059% -81 - C1 -4DMM 12.2 ?
52 PsiBlast_CBE 76.3150% -76 - C1 -2PNF 2.3 FABG_AQUAE
41 PsiBlast_CBE 75.9859% -79 - C1 -4DMM 10.0 ?
32 PsiBlast_CBE 75.7955% -80 - C1 -1Q7B 9.5 FABG_ECOLI
35 PsiBlast_CBE 75.7554% -83 - C1 -3RRO 1.9 FABG_VIBCH
33 PsiBlast_CBE 75.6754% -82 - C1 -4I08 9.9 FABG_VIBCH
11 PsiBlast_PDB 75.4954% -81 - C1 -3RRO 2.6 FABG_VIBCH
10 PsiBlast_PDB 75.3954% -82 - C1 -3RSH 11.5 FABG_VIBCH
50 PsiBlast_CBE 75.3053% -78 - C1 -1EDO 12.3 FABG1_BRANA
7 PsiBlast_PDB 75.2354% -91 - C1 -4WK6 4.1 ?
27 PsiBlast_CBE 75.1254% -91 - C1 -4WK6 5.4 ?
12 PsiBlast_PDB 74.9454% -84 - C1 -4I08 10.6 FABG_VIBCH
34 PsiBlast_CBE 74.1354% -82 - C1 -3RSH 9.8 FABG_VIBCH
26 PsiBlast_CBE 73.2354% -87 - C1 -4WK6 5.2 ?
25 PsiBlast_CBE 71.1654% -90 - C1 -4WK6 5.7 ?
14 PsiBlast_PDB 68.1954% -93 - C1 -3TZC 4.9 ?
111 HHSearch 68.0140% -74 - C1 -3ICC 7.7 ?
113 HHSearch 55.5130% -75 - C1 -3GED 2.3 ?