@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1103: (2016-03-22 )
MFKKLINKKNTINNYNEELDSSNIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNTGLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRTSGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGLSEE

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FPP_A_3(4H8E)
ISPT_STAAN
[Raw transfer]




FPS_A_3(4U82)
ISPT_STAAN
[Raw transfer]




GPP_D_19(2VG3)
DPDS_MYCTU
[Raw transfer]




FPP_B_15(4Q9M)
ISPT_STRR6
[Raw transfer]




IPE_A_4(1X07)
UPPS_ECOLI
[Raw transfer]




FPP_A_4(4Q9M)
ISPT_STRR6
[Raw transfer]




GPP_A_6(2VG3)
DPDS_MYCTU
[Raw transfer]




FPS_C_3(1X08)
UPPS_ECOLI
[Raw transfer]




GPP_A_6(2VG3)
DPDS_MYCTU
[Raw transfer]




B08_A_3(2E99)
UPPS_ECOLI
[Raw transfer]




IPE_A_3(1X09)
UPPS_ECOLI
[Raw transfer]




H78_A_3(3WYJ)
UPPS_ECOLI
[Raw transfer]




GPP_B_9(2VG3)
DPDS_MYCTU
[Raw transfer]




B75_B_5(2E9C)
UPPS_ECOLI
[Raw transfer]




DPO_C_20(2VG2)
DPDS_MYCTU
[Raw transfer]




40B_B_4(4ONC)
DPDS_MYCTU
[Raw transfer]




FPS_A_4(1X06)
UPPS_ECOLI
[Raw transfer]




FPP_C_3(1V7U)
UPPS_ECOLI
[Raw transfer]




B75_A_3(2E9C)
UPPS_ECOLI
[Raw transfer]




GPP_C_15(2VG3)
DPDS_MYCTU
[Raw transfer]




DPO_A_5(2VG2)
DPDS_MYCTU
[Raw transfer]




DPO_C_3(2DTN)
ISPT_HELPY
[Raw transfer]




2BJ_B_4(3SGV)
UPPS_ECOLI
[Raw transfer]




B28_B_5(2E9A)
UPPS_ECOLI
[Raw transfer]




2BJ_B_4(3SGV)
UPPS_ECOLI
[Raw transfer]




2BJ_A_5(3SGV)
UPPS_ECOLI
[Raw transfer]




B76_A_3(2E9D)
UPPS_ECOLI
[Raw transfer]




TH9_B_3(3TH8)
UPPS_ECOLI
[Raw transfer]




B08_A_5(2E99)
UPPS_ECOLI
[Raw transfer]




40B_A_3(4ONC)
DPDS_MYCTU
[Raw transfer]




0FW_A_4(3SGX)
UPPS_ECOLI
[Raw transfer]




GOL_B_19(2VG2)
DPDS_MYCTU
[Raw transfer]




B29_A_4(2E98)
UPPS_ECOLI
[Raw transfer]




IPE_A_4(1X09)
UPPS_ECOLI
[Raw transfer]




B29_A_5(2E98)
UPPS_ECOLI
[Raw transfer]




IPE_B_15(2VG2)
DPDS_MYCTU
[Raw transfer]




B28_A_4(2E9A)
UPPS_ECOLI
[Raw transfer]




B08_B_7(2E99)
UPPS_ECOLI
[Raw transfer]




FFT_B_3(3UGS)
ISPT_CAMJE
[Raw transfer]




P09_B_3(3SGT)
UPPS_ECOL6
[Raw transfer]




FFT_A_4(3UGS)
ISPT_CAMJE
[Raw transfer]




IPE_A_6(2VG2)
DPDS_MYCTU
[Raw transfer]




FFT_B_3(3UGS)
ISPT_CAMJE
[Raw transfer]




0YZ_A_4(4H3C)
UPPS_ECOLI
[Raw transfer]




B29_B_8(2E98)
UPPS_ECOLI
[Raw transfer]




2ZW_B_5(4Q9O)
ISPT_STRR6
[Raw transfer]




2BJ_A_7(3SGV)
UPPS_ECOLI
[Raw transfer]




2ZW_A_3(4Q9O)
ISPT_STRR6
[Raw transfer]




2 PsiBlast_PDB 97.74100%-100 - C8 -4U82 10.3 ISPT_STAAN
3 PsiBlast_PDB 97.66100% -94 - C8 -3WYI - ? -
1 PsiBlast_PDB 97.64100%-102 - C8 -4H8E 10.6 ISPT_STAAN
6 PsiBlast_PDB 84.3653% -86 - C8 -4Q9O 8.7 ISPT_STRR6
22 PsiBlast_CBE 83.6853% -92 - C8 -4Q9O 8.6 ISPT_STRR6
65 HHSearch 83.0866% -97 - C8 -1F75 - UPPS_MICLU -
23 PsiBlast_CBE 83.0853% -91 - C8 -4Q9M 8.1 ISPT_STRR6
5 PsiBlast_PDB 82.9153% -89 - C8 -4Q9M 8.1 ISPT_STRR6
4 PsiBlast_PDB 82.5664% -96 - C8 -1F75 - UPPS_MICLU -
73 Fugue 82.5364% -97 - C8 -1F75 - UPPS_MICLU -
21 PsiBlast_CBE 82.2564%-103 - C8 -1F75 - UPPS_MICLU -
49 PsiBlast_CBE 80.5842% -87 - C8 -1X08 8.0 UPPS_ECOLI
54 PsiBlast_CBE 80.5338% -77 - C8 -2VG3 7.7 DPDS_MYCTU
59 PsiBlast_CBE 80.3838% -75 - C8 -2VG2 3.1 DPDS_MYCTU
11 PsiBlast_PDB 80.2643% -90 - C8 -1X07 5.9 UPPS_ECOLI
10 PsiBlast_PDB 80.1643% -87 - C8 -1X06 9.2 UPPS_ECOLI
48 PsiBlast_CBE 80.1242% -88 - C8 -1X09 5.0 UPPS_ECOLI
64 HHSearch 79.9838% -75 - C8 -2VG3 7.5 DPDS_MYCTU
47 PsiBlast_CBE 79.8743% -91 - C8 -1UEH - UPPS_ECOLI -
50 PsiBlast_CBE 79.7938% -80 - C8 -4ONC 4.4 DPDS_MYCTU
52 PsiBlast_CBE 79.7438% -82 - C8 -2VG3 7.5 DPDS_MYCTU
56 PsiBlast_CBE 79.7338% -82 - C8 -2VG2 2.6 DPDS_MYCTU
55 PsiBlast_CBE 79.6938% -76 - C8 -2VG3 7.5 DPDS_MYCTU
9 PsiBlast_PDB 79.5343% -90 - C8 -1V7U 6.9 UPPS_ECOLI
58 PsiBlast_CBE 79.4138% -77 - C8 -2VG2 4.2 DPDS_MYCTU
51 PsiBlast_CBE 79.3738% -79 - C8 -4ONC 7.3 DPDS_MYCTU
57 PsiBlast_CBE 79.3338% -77 - C8 -2VG2 3.8 DPDS_MYCTU
53 PsiBlast_CBE 79.1838% -80 - C8 -2VG3 7.1 DPDS_MYCTU
19 PsiBlast_PDB 77.9743% -93 - C8 -3SGT 5.9 UPPS_ECOL6
35 PsiBlast_CBE 77.7543% -95 - C8 -3WYJ 8.7 UPPS_ECOLI
12 PsiBlast_PDB 77.7343% -87 - C8 -2E98 5.9 UPPS_ECOLI
13 PsiBlast_PDB 77.5743% -85 - C8 -2E99 7.9 UPPS_ECOLI
44 PsiBlast_CBE 77.3743% -93 - C8 -2E99 5.0 UPPS_ECOLI
43 PsiBlast_CBE 77.2043% -93 - C8 -2E9A 3.9 UPPS_ECOLI
39 PsiBlast_CBE 77.1443% -96 - C8 -3SGX 6.6 UPPS_ECOLI
40 PsiBlast_CBE 77.0843% -91 - C8 -3SGV 5.4 UPPS_ECOLI
26 PsiBlast_CBE 76.8043% -95 - C8 -4H3C 5.2 UPPS_ECOLI
16 PsiBlast_PDB 76.2343% -89 - C8 -2E9D 5.0 UPPS_ECOLI
14 PsiBlast_PDB 76.2243% -92 - C8 -2E9A 4.6 UPPS_ECOLI
36 PsiBlast_CBE 75.5743% -91 - C8 -3TH8 5.0 UPPS_ECOLI
42 PsiBlast_CBE 75.4443% -89 - C8 -2E9C 6.2 UPPS_ECOLI
45 PsiBlast_CBE 75.3543% -92 - C8 -2E98 3.8 UPPS_ECOLI
20 PsiBlast_PDB 75.2243% -96 - C8 -3SGV 6.6 UPPS_ECOLI
63 HHSearch 74.7842% -86 * C8 *3SGV 6.6 UPPS_ECOLI
15 PsiBlast_PDB 74.1643% -90 - C8 -2E9C 6.7 UPPS_ECOLI
60 PsiBlast_CBE 73.5539% -82 - C8 -2DTN 4.7 ISPT_HELPY
62 PsiBlast_CBE 71.4032% -98 - C8 -3UGS 5.7 ISPT_CAMJE
66 HHSearch 71.2233% -97 - C8 -3UGS 5.9 ISPT_CAMJE
61 PsiBlast_CBE 70.5032% -98 - C8 -3UGS 5.9 ISPT_CAMJE