@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1114: (2016-03-22 )
MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDIDRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQIKELHEQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKNEFDNKIKDQIVFIDDDSEKVLAIYMVHPTKESEIKPKKVFN

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_D_4(3MQK)
TRUB_PYRFU
[Raw transfer]

-

NACID_D_2(1ZE2)
TRUB_THEMA
[Raw transfer]

-

URA_A_2(1KSK)
RSUA_ECOLI
[Raw transfer]




BU1_A_4(1VIO)
RSUA_HAEIN
[Raw transfer]




NACID_E_5(3LWO)
TRUB_PYRFU
[Raw transfer]

-

NACID_F_6(3HAY)
TRUB_PYRFU
[Raw transfer]

-

NACID_F_5(3HAX)
TRUB_PYRFU
[Raw transfer]

-

NACID_C_1(1R3E)
TRUB_THEMA
[Raw transfer]

-

CHAIN_E_5(3LWP)
TRUB_PYRFU
[Raw transfer]

-

NACID_C_1(1R3E)
TRUB_THEMA
[Raw transfer]

-

NACID_D_2(1ZE2)
TRUB_THEMA
[Raw transfer]

-

NACID_C_1(1R3E)
TRUB_THEMA
[Raw transfer]

-

NACID_B_1(2AB4)
TRUB_THEMA
[Raw transfer]

-

NACID_E_5(3LWV)
TRUB_PYRFU
[Raw transfer]

-

CHAIN_E_5(3LWQ)
TRUB_PYRFU
[Raw transfer]

-

NACID_E_5(3LWR)
TRUB_PYRFU
[Raw transfer]

-

CHAIN_D_1(2RFK)
TRUB_PYRFU
[Raw transfer]

-

NACID_B_1(1K8W)
TRUB_ECOLI
[Raw transfer]

-

NACID_B_1(1K8W)
TRUB_ECOLI
[Raw transfer]

-

CHAIN_D_4(3HJY)
TRUB_PYRFU
[Raw transfer]

-

NACID_B_1(1K8W)
TRUB_ECOLI
[Raw transfer]

-

NACID_E_5(3HJW)
TRUB_PYRFU
[Raw transfer]

-

49 Fugue 93.0135% -76 - C4 -1R3E 15.4 TRUB_THEMA
29 HHSearch 88.8334% -84 * C4 *1R3E 14.9 TRUB_THEMA
6 PsiBlast_PDB 87.9933% -79 - C4 -1R3E 15.0 TRUB_THEMA
5 PsiBlast_PDB 87.6033% -78 - C4 -1ZE2 3.2 TRUB_THEMA
48 Fugue 87.3131% -76 - C4 -1K8W 14.7 TRUB_ECOLI
7 PsiBlast_PDB 86.6633% -76 - C4 -2AB4 13.4 TRUB_THEMA
28 HHSearch 86.5032% -80 - C4 -1K8W 13.5 TRUB_ECOLI
4 PsiBlast_PDB 86.3933% -71 - C4 -1ZE1 - TRUB_THEMA -
23 PsiBlast_CBE 84.5833% -69 - C4 -1ZE1 - TRUB_THEMA -
21 PsiBlast_CBE 83.9733% -77 - C4 -1ZE1 - TRUB_THEMA -
22 PsiBlast_CBE 83.5733% -70 - C4 -1ZE1 - TRUB_THEMA -
33 HHSearch 83.5233%-118 - C4 -2AUS - TRUB_PYRAB -
31 HHSearch 83.1034%-108 - C4 -2APO - TRUB_METJA -
32 HHSearch 82.4730% -97 - C4 -3U28 - CBF5_YEAST -
3 PsiBlast_PDB 77.7037% -74 - C4 -1ZL3 - TRUB_ECOLI -
30 HHSearch 76.8530% -89 - C4 -1SGV - TRUB_MYCTU -
10 PsiBlast_PDB 76.8032%-122 - C4 -2HVY - TRUB_PYRFU -
18 PsiBlast_PDB 76.5932%-120 - C4 -3MQK Error TRUB_PYRFU
1 PsiBlast_PDB 76.5337% -73 - C4 -1K8W 14.5 TRUB_ECOLI
20 PsiBlast_PDB 75.6032%-114 - C4 -3HJW 9.1 TRUB_PYRFU
11 PsiBlast_PDB 75.5932%-115 - C4 -3HAX 8.4 TRUB_PYRFU
25 PsiBlast_CBE 75.5532%-120 - C4 -3HJY 6.3 TRUB_PYRFU
13 PsiBlast_PDB 75.1432%-117 - C4 -3LWO 4.8 TRUB_PYRFU
14 PsiBlast_PDB 75.1332%-122 - C4 -3LWP 5.1 TRUB_PYRFU
26 PsiBlast_CBE 74.2731%-114 - C4 -2RFK 3.4 TRUB_PYRFU
12 PsiBlast_PDB 74.2032%-110 - C4 -3HAY 7.3 TRUB_PYRFU
17 PsiBlast_PDB 74.1032%-118 - C4 -3LWV 3.5 TRUB_PYRFU
16 PsiBlast_PDB 73.8332%-119 - C4 -3LWR 2.8 TRUB_PYRFU
15 PsiBlast_PDB 73.6832%-113 - C4 -3LWQ 5.1 TRUB_PYRFU
24 PsiBlast_CBE 70.0633% -74 - C4 -1ZE2 10.1 TRUB_THEMA