@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1138: (2016-03-22 )
MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGSGIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCTDNANGNEIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAKPEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLYSFEQQKIEFEQRQNTENNQEKTFSSEESNSKSFMAENQNDEIVIKEDSYNPFVTKTSESLITDDESSGYNNTREKDEDYFKKQQEILQEMDQTFDSNEDASVQNYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEKKVDIKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKRVM

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_4(1NHJ)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_9(1NHH)
MUTL_ECOLI
[Raw transfer]



ANP_A_6(1NHI)
MUTL_ECOLI
[Raw transfer]



SAP_A_4(1H7U)
PMS2_HUMAN
[Raw transfer]



ADP_A_4(1EA6)
PMS2_HUMAN
[Raw transfer]
9 PsiBlast_PDB 90.2640% -85 - C1 -1B63 10.0 MUTL_ECOLI
24 HHSearch 89.7639% -83 - C1 -1B63 10.0 MUTL_ECOLI
12 PsiBlast_PDB 89.4039% -83 - C1 -1NHJ 10.2 MUTL_ECOLI
11 PsiBlast_PDB 88.7940% -87 - C1 -1NHI 10.1 MUTL_ECOLI
10 PsiBlast_PDB 88.7540% -86 - C1 -1NHH 10.1 MUTL_ECOLI
45 Fugue 88.7138% -89 - C1 -1B63 10.0 MUTL_ECOLI
6 PsiBlast_PDB 78.8540% -89 - C1 -5AKD - ? -
5 PsiBlast_PDB 78.6840% -87 - C1 -5AKC - ? -
4 PsiBlast_PDB 78.6540% -85 - C1 -5AKB - ? -
8 PsiBlast_PDB 77.8840% -3 - C- -1B62 - MUTL_ECOLI -
26 HHSearch 77.6727% -89 - C1 -3H4L - PMS1_YEAST -
16 PsiBlast_PDB 77.2127% -89 - C1 -3H4L - PMS1_YEAST -
14 PsiBlast_PDB 77.0629%-101 - C1 -1H7U 4.3 PMS2_HUMAN
13 PsiBlast_PDB 76.1629% -99 - C1 -1EA6 3.8 PMS2_HUMAN
7 PsiBlast_PDB 75.8040% -86 - C1 -1BKN - MUTL_ECOLI -
1 PsiBlast_PDB 73.8962%-121 - C2 -3GAB - MUTL_BACSU -
21 PsiBlast_CBE 73.3162%-124 - C2 -3KDK - -
27 HHSearch 73.0662%-118 - C2 -3KDG - MUTL_BACSU -
2 PsiBlast_PDB 73.0562%-118 - C2 -3KDG - MUTL_BACSU -
46 Fugue 72.9660%-117 * C2 *3KDG - MUTL_BACSU -
50 Fugue 62.5446% -50 - C1 -1B63 9.5 MUTL_ECOLI
48 Fugue 59.8144% -54 - C1 -1B63 9.5 MUTL_ECOLI