@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1141: (2016-03-22 )
MEKYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINENDVRADQIAGIGITNQRETTVVWDKHTGRPIYHAIVWQSRQTQSICSELKQQGYEQTFRDKTGLLLDPYFAGTKVKWILDNVEGAREKAENGDLLFGTIDTWLVWKLSGKAAHITDYSNASRTLMFNIHDLEWDDELLELLTVPKNMLPEVKPSSEIYGKTIDYHFYGQEVPIAGVAGDQQAALFGQACFECGDVKNTYGTGGFMLMNTGDKAVKSESGLLTTIAYGIDGKVNYALEGSIFVSGSAIQWLRDGLRMINSAPQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDIAKNWKLEEKFDPKMDEGEREKLYRGWKKAVEATQVFKTE

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_G_6(1GLC)
GLPK_ECOLI
[Raw transfer]




ATS_Y_4(1GLJ)
GLPK_ECOLI
[Raw transfer]




ATF_Y_5(1BWF)
GLPK_ECOLI
[Raw transfer]




ADP_G_6(1GLE)
GLPK_ECOLI
[Raw transfer]




ADP_G_5(1GLD)
GLPK_ECOLI
[Raw transfer]




ACP_Y_5(1GLL)
GLPK_ECOLI
[Raw transfer]




ATS_O_5(1GLJ)
GLPK_ECOLI
[Raw transfer]




ACP_O_6(1GLL)
GLPK_ECOLI
[Raw transfer]




GOL_G_9(1GLA)
GLPK_ECOLI
[Raw transfer]




GOL_I_9(1BOT)
GLPK_ECOLI
[Raw transfer]




GOL_O_8(3H3N)
GLPK_ENTCA
[Raw transfer]




GOL_O_3(3FLC)
GLPK_ENTCA
[Raw transfer]




GOL_O_7(3H46)
GLPK_ENTCA
[Raw transfer]




GOL_Z_5(1BO5)
GLPK_ECOLI
[Raw transfer]




GOL_O_3(3D7E)
GLPK_ENTCA
[Raw transfer]




GOL_G_7(1BOT)
GLPK_ECOLI
[Raw transfer]




GOL_O_4(1BO5)
GLPK_ECOLI
[Raw transfer]




ATF_O_6(1BWF)
GLPK_ECOLI
[Raw transfer]




GOL_C_3(1XUP)
GLPK_ENTCA
[Raw transfer]




EDO_B_21(2W41)
?
[Raw transfer]




EDO_A_5(2W41)
?
[Raw transfer]




MPD_C_3(2D4W)
?
[Raw transfer]




MPD_C_3(2D4W)
?
[Raw transfer]




MPD_D_4(2D4W)
?
[Raw transfer]




EDO_A_9(2W41)
?
[Raw transfer]




EDO_B_25(2W41)
?
[Raw transfer]




85 HHSearch 99.4199% -83 - C4 -3G25 - GLPK_STAAC -
2 PsiBlast_PDB 99.2297% -81 - C4 -3GE1 - GLPK_STAAC -
1 PsiBlast_PDB 98.8997% -83 - C4 -3G25 - GLPK_STAAC -
25 PsiBlast_CBE 90.0563% -76 - C4 -3H46 3.6 GLPK_ENTCA
5 PsiBlast_PDB 89.5763% -74 - C4 -3H3O - GLPK_ENTCA -
24 PsiBlast_CBE 89.4463% -75 - C4 -3H3N 3.5 GLPK_ENTCA
26 PsiBlast_CBE 89.3963% -77 - C4 -3H45 - GLPK_ENTCA -
8 PsiBlast_PDB 89.2863% -74 - C4 -3FLC 3.5 GLPK_ENTCA
28 PsiBlast_CBE 88.9563% -77 - C4 -3H45 - GLPK_ENTCA -
23 PsiBlast_CBE 88.8863% -76 - C4 -3H3O - GLPK_ENTCA -
27 PsiBlast_CBE 88.8263% -75 - C4 -3H45 - GLPK_ENTCA -
30 PsiBlast_CBE 88.3863% -75 - C4 -3D7E - GLPK_ENTCA -
9 PsiBlast_PDB 88.3863% -75 - C4 -3D7E 3.6 GLPK_ENTCA
22 PsiBlast_CBE 88.1863% -74 - C4 -3H3O - GLPK_ENTCA -
35 PsiBlast_CBE 87.5361% -78 - C4 -3EZW - GLPK_ECOLI -
83 HHSearch 87.4461% -72 - C4 -3EZW - GLPK_ECOLI -
36 PsiBlast_CBE 87.4461% -77 - C4 -3EZW - GLPK_ECOLI -
38 PsiBlast_CBE 87.1161% -77 - C4 -3EZW - GLPK_ECOLI -
40 PsiBlast_CBE 86.8161% -74 - C4 -3EZW - GLPK_ECOLI -
12 PsiBlast_PDB 86.7061% -73 - C4 -3EZW - GLPK_ECOLI -
20 PsiBlast_PDB 86.1061% -72 - C4 -1BO5 4.1 GLPK_ECOLI
51 PsiBlast_CBE 86.0961% -75 - C4 -1BWF 5.8 GLPK_ECOLI
49 PsiBlast_CBE 86.0661% -76 - C4 -1GLJ 4.7 GLPK_ECOLI
44 PsiBlast_CBE 86.0661% -75 - C4 -1BOT 4.6 GLPK_ECOLI
45 PsiBlast_CBE 85.8061% -73 - C4 -1BO5 2.7 GLPK_ECOLI
47 PsiBlast_CBE 85.7661% -76 - C4 -1GLL 5.4 GLPK_ECOLI
16 PsiBlast_PDB 85.4161% -73 - C4 -1GLD 5.8 GLPK_ECOLI
90 HHSearch 85.2252% -79 - C4 -2D4W 3.9 ?
15 PsiBlast_PDB 85.2061% -72 - C4 -1GLC 5.2 GLPK_ECOLI
53 PsiBlast_CBE 85.1552% -84 - C4 -2D4W 3.9 ?
17 PsiBlast_PDB 84.9561% -72 - C4 -1GLE 5.4 GLPK_ECOLI
13 PsiBlast_PDB 84.8461% -74 - C4 -1GLA 2.4 GLPK_ECOLI
19 PsiBlast_PDB 84.8361% -71 - C4 -1BOT 4.1 GLPK_ECOLI
50 PsiBlast_CBE 84.7461% -72 - C4 -1BWF 5.8 GLPK_ECOLI
48 PsiBlast_CBE 84.7461% -73 - C4 -1GLJ 6.7 GLPK_ECOLI
46 PsiBlast_CBE 84.5861% -70 - C4 -1GLL 5.0 GLPK_ECOLI
52 PsiBlast_CBE 84.1552% -81 - C4 -2D4W 3.2 ?
67 PsiBlast_CBE 80.4138% -73 - C4 -2W41 3.1 ?
66 PsiBlast_CBE 80.1938% -74 - C4 -2W41 2.9 ?
10 PsiBlast_PDB 80.0563% -68 - C4 -1XUP 2.5 GLPK_ENTCA