@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1172: (2016-03-22 )
MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPKKFKLPVVPANMQTVMNEKLAKWFAENDYFYIMHRFDEEARIPFIKHMQNSGLFASISVGVKKAEFDFIEKLAQEKLIPEYITIDIAHGHSDSVINMIKHIKNHIPDSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAARKPLIADGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKEYFGSASEFQKGEHKNVEGKKMFVEHKGSLMDTLKEMQQDLQSSISYAGGKDLKSLRTVDYVIVRNSIFNGDRD

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_8(4X3Z)
?
[Raw transfer]




NAJ_A_4(4QNE)
?
[Raw transfer]




NAD_A_4(4X3Z)
?
[Raw transfer]




IMP_C_8(4IX2)
?
[Raw transfer]




IMP_D_11(4IX2)
?
[Raw transfer]




NAJ_B_7(4QNE)
?
[Raw transfer]




IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]




IMP_A_2(4R7J)
?
[Raw transfer]




XMP_B_4(3TSD)
?
[Raw transfer]




5GP_A_13(2A7R)
GMPR2_HUMAN
[Raw transfer]




5GP_A_2(2A1Y)
GUAC_BACAN
[Raw transfer]




IMP_B_6(4FO4)
?
[Raw transfer]




IMP_A_5(4IX2)
?
[Raw transfer]




IMP_B_6(4IX2)
?
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




IMP_A_3(4FO4)
?
[Raw transfer]




XMP_A_3(3TSD)
?
[Raw transfer]




2F1_C_20(4MZ1)
?
[Raw transfer]




39H_C_9(4QM1)
?
[Raw transfer]




XMP_A_2(4QQ3)
?
[Raw transfer]




39H_A_6(4QM1)
?
[Raw transfer]




RVP_A_4(1ME8)
IMDH_TRIFO
[Raw transfer]




2F1_B_12(4MZ1)
?
[Raw transfer]




Q21_B_18(4MY8)
?
[Raw transfer]




2EY_B_8(4MYA)
?
[Raw transfer]




2EY_A_4(4MYA)
?
[Raw transfer]




Q21_A_6(4MY8)
?
[Raw transfer]




Q21_B_13(4MY8)
?
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




39H_C_10(4QM1)
?
[Raw transfer]




39H_B_8(4QM1)
?
[Raw transfer]




1 PsiBlast_PDB 96.9879%-106 - C2 -2A1Y 6.0 GUAC_BACAN
69 PsiBlast_CBE 72.7935% -81 - C2 -4Q33 - ? -
23 PsiBlast_CBE 72.7735% -78 - C2 -4QM1 4.6 ?
76 PsiBlast_CBE 72.7435% -80 - C2 -4Q32 - ? -
75 PsiBlast_CBE 72.7335% -84 - C2 -4Q32 - ? -
73 PsiBlast_CBE 72.5735% -84 - C2 -4Q33 - ? -
90 PsiBlast_CBE 72.5236% -78 - C2 -3KHJ - ? -
72 PsiBlast_CBE 72.5235% -84 - C2 -4Q33 - ? -
74 PsiBlast_CBE 72.4135% -83 - C2 -4Q32 - ? -
70 PsiBlast_CBE 72.3535% -81 - C2 -4Q33 - ? -
14 PsiBlast_PDB 72.2635% -88 - C2 -4Q33 - ? -
28 PsiBlast_CBE 71.8435% -79 - C2 -4MYX - ? -
51 PsiBlast_CBE 71.8133% -75 - C2 -2C6Q - GMPR2_HUMAN -
8 PsiBlast_PDB 71.2733% -71 - C2 -2A7R 6.4 GMPR2_HUMAN
71 PsiBlast_CBE 71.2635% -85 - C2 -4Q33 - ? -
9 PsiBlast_PDB 71.1833% -76 - C2 -2BZN - GMPR2_HUMAN -
6 PsiBlast_PDB 71.1135% -78 - C2 -4MYX - ? -
56 PsiBlast_CBE 71.0233% -74 - C2 -2C6Q - GMPR2_HUMAN -
105 HHSearch 70.9735% -70 - C2 -2C6Q - GMPR2_HUMAN -
22 PsiBlast_CBE 70.8635% -77 - C2 -4QM1 4.0 ?
31 PsiBlast_CBE 70.8335% -75 - C2 -4MYA 3.4 ?
21 PsiBlast_CBE 70.2935% -74 - C2 -4QM1 3.8 ?
40 PsiBlast_CBE 70.0535% -79 - C2 -4MY8 4.3 ?
4 PsiBlast_PDB 69.6735% -75 - C2 -4MYA 3.7 ?
103 PsiBlast_CBE 69.5731% -76 - C2 -4MZ1 4.5 ?
7 PsiBlast_PDB 69.2635% -74 - C2 -4QM1 4.4 ?
102 PsiBlast_CBE 69.0831% -74 - C2 -4R7J 6.2 ?
41 PsiBlast_CBE 68.7935% -76 - C2 -4MY8 4.4 ?
104 PsiBlast_CBE 68.5231% -74 - C2 -4MZ1 3.9 ?
111 HHSearch 67.9534% -88 - C2 -3USB 4.3 ?
2 PsiBlast_PDB 67.8735% -74 - C2 -4MY8 4.1 ?
114 HHSearch 67.4733% -73 - C2 -1ZFJ 5.2 IMDH_STRPY
97 PsiBlast_CBE 66.1932% -79 * C2 *4IX2 5.4 ?
98 PsiBlast_CBE 64.4032% -77 - C2 -4IX2 5.5 ?
100 PsiBlast_CBE 63.9632% -76 - C2 -4IX2 4.5 ?
99 PsiBlast_CBE 63.9532% -73 - C2 -4IX2 4.7 ?
92 PsiBlast_CBE 63.9032% -74 - C2 -4X3Z 6.5 ?
94 PsiBlast_CBE 63.0832% -81 - C2 -4QQ3 6.2 ?
101 PsiBlast_CBE 62.8432% -71 - C2 -4FO4 5.3 ?
96 PsiBlast_CBE 62.3332% -70 - C2 -4QNE 5.4 ?
93 PsiBlast_CBE 62.1032% -74 - C2 -4X3Z 5.1 ?
95 PsiBlast_CBE 61.4232% -67 - C2 -4QNE 4.8 ?
116 HHSearch 61.2230% -70 - C2 -2CU0 6.0 IMDH_PYRHO
20 PsiBlast_PDB 60.8332% -73 - C2 -4FO4 5.9 ?
16 PsiBlast_PDB 56.8040% -86 - C2 -3TSD 4.9 ?
77 PsiBlast_CBE 55.6540% -85 - C2 -3TSD 5.3 ?