@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1199: (2016-03-23 )
MDIFYKKIKANVTPEVLAQLHSKKIILESTNQQQTKGRYSVVIFDIYGTLTLDNDVLSVSTLKESYQIIERPYHYLTTKINEDYHNIQDEQLKSLPFISGYVGTCSFDLVRHEFPKLQSIQLEDHKQHDVRLYMVEQVYVFDHYKDELYIIATNQFSNSTKSDLENRVNKSIEDLTKIQPFMPTQDFDFKTKEIQSNISEERFIEMIQYFKEKITEGDMFQVVPSRIYKYAHHASQHLNQLSFQLYQNLKRQNPSPYMYYLNIDQPYIVGSSPESFVSVKDQIVTTNPIAGTIQRGETTQIDNENMKQLLNDPKECSEHRMLVDLGRNDIHRVSKIGTSKITKLMVIEKYEHVMHIVSEITGKINQNLSPMTVIANLLPTGTVSGAPKLRAIERIYEQYPHKRGVYSGGVGYINCNHNLDFALAIRTMMIDEQYINVEAGCGVVYDSIPEKELNETKLKAKSLLEVRP

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ISC_A_5(3HWO)
ENTC_ECOLI
[Raw transfer]



0GA_A_5(5CWA)
?
[Raw transfer]



SAL_A_8(2FN1)
?
[Raw transfer]



SAL_B_6(2FN1)
?
[Raw transfer]



BEZ_A_4(3R75)
?
[Raw transfer]



VAE_A_3(3RV6)
MBTI_MYCTU
[Raw transfer]



15P_A_5(4GRH)
?
[Raw transfer]



PYR_B_5(2FN1)
?
[Raw transfer]



PYR_A_7(2FN1)
?
[Raw transfer]
1 PsiBlast_PDB 94.3332% -72 - C1 -5CWA 3.5 ?
27 HHSearch 91.5228% -67 - C1 -1I1Q - TRPE_SALTY -
40 Fugue 91.4628% -68 - C1 -1I1Q - TRPE_SALTY -
42 Fugue 89.9728% -72 - C1 -1K0E - PABB_ECOLI -
25 HHSearch 88.7927% -68 - C1 -1K0E - PABB_ECOLI -
6 PsiBlast_PDB 88.4328% -79 - C1 -1K0E - PABB_ECOLI -
7 PsiBlast_PDB 85.4428% -81 - C1 -1K0G - PABB_ECOLI -
4 PsiBlast_PDB 83.0332% -66 - C1 -1I7S - TRPE_SERMA -
21 PsiBlast_CBE 81.4532% -62 - C1 -1I7S - TRPE_SERMA -
5 PsiBlast_PDB 81.2131% -66 - C1 -1I1Q - TRPE_SALTY -
2 PsiBlast_PDB 80.4430% -57 - C1 -4GRH 2.3 ?
22 PsiBlast_CBE 78.9032% -58 - C1 -1I7Q - TRPE_SERMA -
3 PsiBlast_PDB 77.9332% -62 - C1 -1I7Q - TRPE_SERMA -
26 HHSearch 73.0835% -33 - C- -1QDL - TRPE_SULSO -
46 Fugue 69.3221% -63 - C1 -3HWO - ENTC_ECOLI -
44 Fugue 68.6117% -45 - C1 -3BZM - MENF_ECOLI -
43 Fugue 64.8518% -44 - C1 -2EUA - MENF_ECOLI -
12 PsiBlast_PDB 60.5928% -63 - C1 -3OS6 - ? -
30 HHSearch 59.9627% -55 - C1 -3OS6 - ? -
31 HHSearch 59.0124% -59 - C1 -3HWO - ENTC_ECOLI -
9 PsiBlast_PDB 44.8931% -32 - C1 -2FN1 3.9 ?
23 PsiBlast_CBE 44.8431% -30 - C1 -2FN1 3.0 ?