@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1204: (2016-03-23 )
MNKQIQTEADELGFFGEYGGQYVPETLMPAIIELKKAYKEAKADPEFQRELEYYLSEYVGRATPLTYAASYTESLGGAKIYLKREDLNHTGAHKINNALGQALLAKRMGKKKLVAETGAGQHGVASATVAALFDMELVVFMGSEDIKRQQLNVFRMELLGAKVVAVEEGQGTLSDAVNKALQYWVSHVDDTHYLLGSALGPDPFPTIVRDFQSVIGKEIKSQILKKEGRLPDAIVACIGGGSNAIGTFYPFIKDDVALYGVEAAGQGEDTDKHALAIGKGSPGVLHGTKMYLIQDEGGQVQLAHSISAGLDYPGIGPEHSYYHDIGRVTFENASDTQAMNALINFTKHEGIIPAIESAHALSYVERLAPTMSKEDIIVVTISGRGDKDMETIRQYMAERGLAND

Atome Classification :

(65 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1D0_B_5(4HPJ)
TRPB_SALTY
[Raw transfer]




AQ3_B_8(4KKX)
TRPB_SALTY
[Raw transfer]




7MN_B_4(3PR2)
TRPB_SALTY
[Raw transfer]




PLS_B_4(1KFE)
TRPB_SALTY
[Raw transfer]




0JO_B_8(4HPX)
TRPB_SALTY
[Raw transfer]




PLS_B_4(1KFJ)
TRPB_SALTY
[Raw transfer]




PLS_B_5(2TRS)
TRPB_SALTY
[Raw transfer]




0JO_B_4(4HN4)
TRPB_SALTY
[Raw transfer]




PLS_B_5(2TSY)
TRPB_SALTY
[Raw transfer]




P1T_B_4(2J9X)
TRPB_SALTY
[Raw transfer]




PLT_B_4(2TYS)
TRPB_SALTY
[Raw transfer]




PLS_B_9(1BEU)
TRPB_SALTY
[Raw transfer]




GOL_A_7(4NEG)
TRPB_BACAN
[Raw transfer]




PLT_B_4(2TYS)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1A5S)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1UBS)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1K7E)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1KFC)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1K8Z)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2RH9)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1K8X)
TRPB_SALTY
[Raw transfer]




PLP_B_9(1A5B)
TRPB_SALTY
[Raw transfer]




PLP_A_4(2DH5)
TRPB_ECOLI
[Raw transfer]




PLP_B_5(1K8Y)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1KFK)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1FUY)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1K3U)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1TJP)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2CLH)
TRPB_SALTY
[Raw transfer]




PLP_B_7(1A5A)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2CLI)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1A50)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1K7X)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1KFB)
TRPB_SALTY
[Raw transfer]




PLP_B_7(1K7F)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1QOQ)
TRPB_SALTY
[Raw transfer]




PLP_B_6(1TTQ)
TRPB_SALTY
[Raw transfer]




PLP_B_5(2CLE)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1CX9)
TRPB_SALTY
[Raw transfer]




PLP_B_12(4HT3)
TRPB_SALTY
[Raw transfer]




PLP_B_4(2CLK)
TRPB_SALTY
[Raw transfer]




PLP_B_4(2WSY)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1QOP)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1BKS)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1C29)
TRPB_SALTY
[Raw transfer]




PLP_B_5(1TTP)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1WBJ)
TRPB_SALTY
[Raw transfer]




PLR_B_3(4QYS)
TRPB2_SULSO
[Raw transfer]




PLP_B_5(1C8V)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1C9D)
TRPB_SALTY
[Raw transfer]




PLP_B_4(1CW2)
TRPB_SALTY
[Raw transfer]




EDO_B_13(4HT3)
TRPB_SALTY
[Raw transfer]




F6F_B_4(2CLF)
TRPB_SALTY
[Raw transfer]




PLP_B_7(3CEP)
TRPB_SALTY
[Raw transfer]




102 HHSearch 94.0656% -71 - C3 -1X1Q - TRPB_THET2 -
25 PsiBlast_CBE 93.1458% -73 - C3 -1WDW - TRPB1_PYRFU -
23 PsiBlast_CBE 93.0758% -72 - C3 -1WDW - TRPB1_PYRFU -
4 PsiBlast_PDB 92.9755% -73 - C3 -1X1Q - TRPB_THET2 -
22 PsiBlast_CBE 92.9558% -73 - C3 -1WDW - TRPB1_PYRFU -
21 PsiBlast_CBE 92.9258% -72 - C3 -1WDW - TRPB1_PYRFU -
24 PsiBlast_CBE 92.8458% -72 - C3 -1WDW - TRPB1_PYRFU -
2 PsiBlast_PDB 92.4258% -71 - C3 -1WDW - TRPB1_PYRFU -
27 PsiBlast_CBE 92.2658% -68 - C3 -1V8Z - TRPB1_PYRFU -
28 PsiBlast_CBE 92.1058% -70 - C3 -1V8Z - TRPB1_PYRFU -
26 PsiBlast_CBE 91.3858% -70 - C3 -1V8Z - TRPB1_PYRFU -
1 PsiBlast_PDB 91.0264% -94 - C3 -4NEG 2.2 TRPB_BACAN
3 PsiBlast_PDB 90.8458% -69 - C3 -1V8Z - TRPB1_PYRFU -
15 PsiBlast_PDB 90.7950% -67 - C3 -1TJP 4.7 TRPB_SALTY
37 PsiBlast_CBE 90.6550% -66 - C3 -1KFJ 8.4 TRPB_SALTY
14 PsiBlast_PDB 90.3050% -68 - C3 -1KFB 4.9 TRPB_SALTY
63 PsiBlast_CBE 90.2550% -69 - C3 -1QOQ 5.5 TRPB_SALTY
11 PsiBlast_PDB 90.1350% -66 - C3 -1K3U 4.5 TRPB_SALTY
17 PsiBlast_PDB 90.0450% -67 - C3 -2CLI 4.7 TRPB_SALTY
53 PsiBlast_CBE 90.0050% -66 - C3 -2CLH 4.3 TRPB_SALTY
42 PsiBlast_CBE 89.9450% -66 - C3 -1KFE 8.4 TRPB_SALTY
12 PsiBlast_PDB 89.7650% -64 - C3 -1K7E 4.8 TRPB_SALTY
34 PsiBlast_CBE 89.6850% -63 - C3 -4HN4 8.7 TRPB_SALTY
54 PsiBlast_CBE 89.6350% -67 - C3 -2CLF 3.7 TRPB_SALTY
36 PsiBlast_CBE 89.5850% -66 - C3 -1KFK 4.7 TRPB_SALTY
38 PsiBlast_CBE 89.5650% -66 - C3 -1KFC 5.3 TRPB_SALTY
35 PsiBlast_CBE 89.5450% -67 - C3 -2RH9 5.1 TRPB_SALTY
65 PsiBlast_CBE 89.5249% -68 - C3 -2DH5 4.5 TRPB_ECOLI
55 PsiBlast_CBE 89.5050% -68 - C3 -2CLE 5.0 TRPB_SALTY
32 PsiBlast_CBE 89.3850% -63 - C3 -4HPX 9.1 TRPB_SALTY
57 PsiBlast_CBE 89.3050% -68 - C3 -1K8Z 4.9 TRPB_SALTY
10 PsiBlast_PDB 89.2350% -67 - C3 -1QOP 5.1 TRPB_SALTY
68 PsiBlast_CBE 89.1950% -71 * C3 *1FUY 5.6 TRPB_SALTY
18 PsiBlast_PDB 89.1950% -67 - C3 -2CLK 5.3 TRPB_SALTY
16 PsiBlast_PDB 89.1950% -67 - C3 -1WBJ 5.3 TRPB_SALTY
31 PsiBlast_CBE 89.1850% -67 - C3 -4HT3 5.0 TRPB_SALTY
8 PsiBlast_PDB 89.1650% -71 - C3 -1A5B 5.2 TRPB_SALTY
7 PsiBlast_PDB 89.1450% -70 - C3 -1A5A 5.3 TRPB_SALTY
39 PsiBlast_CBE 89.0650% -67 - C3 -1K8X 5.3 TRPB_SALTY
33 PsiBlast_CBE 89.0350% -62 - C3 -4HPJ 10.8 TRPB_SALTY
56 PsiBlast_CBE 88.9450% -67 - C3 -1A50 4.3 TRPB_SALTY
40 PsiBlast_CBE 88.8950% -70 - C3 -1TTQ 4.1 TRPB_SALTY
9 PsiBlast_PDB 88.8450% -67 - C3 -1BEU 7.0 TRPB_SALTY
30 PsiBlast_CBE 88.5750% -62 - C3 -4KKX 10.2 TRPB_SALTY
59 PsiBlast_CBE 88.5350% -68 - C3 -1K7X 5.0 TRPB_SALTY
62 PsiBlast_CBE 88.5050% -68 - C3 -1UBS 6.5 TRPB_SALTY
48 PsiBlast_CBE 88.4850% -68 - C3 -1BKS 4.5 TRPB_SALTY
13 PsiBlast_PDB 88.3850% -74 - C3 -1K7F 4.3 TRPB_SALTY
20 PsiBlast_PDB 88.2650% -63 - C3 -2J9X 7.8 TRPB_SALTY
66 PsiBlast_CBE 88.1750% -62 - C3 -2TYS 10.2 TRPB_SALTY
41 PsiBlast_CBE 88.1550% -70 - C3 -1TTP 3.8 TRPB_SALTY
43 PsiBlast_CBE 88.0650% -67 - C3 -1CX9 4.5 TRPB_SALTY
58 PsiBlast_CBE 88.0550% -66 - C3 -1K8Y 4.9 TRPB_SALTY
45 PsiBlast_CBE 87.9250% -65 - C3 -1C9D 4.4 TRPB_SALTY
49 PsiBlast_CBE 87.8950% -64 - C3 -1A5S 6.7 TRPB_SALTY
61 PsiBlast_CBE 87.6950% -65 - C3 -2TRS 7.2 TRPB_SALTY
29 PsiBlast_CBE 87.6850% -62 - C3 -3CEP 10.3 TRPB_SALTY
47 PsiBlast_CBE 87.4950% -64 - C3 -1C29 4.7 TRPB_SALTY
46 PsiBlast_CBE 87.3850% -66 - C3 -1C8V 4.9 TRPB_SALTY
69 PsiBlast_CBE 87.2550% -62 - C3 -3PR2 10.8 TRPB_SALTY
44 PsiBlast_CBE 87.0250% -65 - C3 -1CW2 4.8 TRPB_SALTY
60 PsiBlast_CBE 86.4950% -65 - C3 -2TSY 7.0 TRPB_SALTY
50 PsiBlast_CBE 85.6550% -74 - C3 -2WSY 4.4 TRPB_SALTY
122 Fugue 85.5347% -60 - C3 -2TYS 8.4 TRPB_SALTY
71 PsiBlast_CBE 66.1231% -50 - C3 -4QYS 4.9 TRPB2_SULSO