@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1224: (2016-03-23 )
MLQVTDVSLRFGDRKLFEDVNIKFTEGNCYGLIGANGAGKSTFLKILSGELDSQTGHVSLGKNERLAVLKQDHYAYEDERVLDVVIKGHERLYEVMKEKDEIYMKPDFSDEDGIRAAELEGEFAEMNGWNAEADAANLLSGLGIDPTLHDKKMAELENNQKIKVLLAQSLFGEPDVLLLDEPTNGLDIPAISWLEDFLINFDNTVIVVSHDRHFLNNVCTHIADLDFGKIKVYVGNYDFWYQSSQLAQKMAQEQNKKKEEKMKELQDFIARFSANASKSKQATSRKKQLEKIELDDIQPSSRRYPFVKFTPEREIGNDLLIVQNLSKTIDGEKVLDNVSFTMNPNDKAILIGDSEIAKTTLLKILAGEMEPDEGSFKWGVTTSLSYFPKDNSEFFEGVNMNLVDWLRQYAPEDEQTETFLRGFLGRMLFSGEEVKKKASVLSGGEKVRCMLSKMMLSSANVLLLDEPTNHLDLESITAVNDGLKSFKGSIIFTSYDFEFINTIANRVIDLNKQGGVSKEIPYEEYLQEIGVLK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_7(3BK7)
?
[Raw transfer]



ADP_B_4(3J15)
?
[Raw transfer]
1 PsiBlast_PDB 77.7230% -52 - C1 -3J5S - ETTA_ECOLI -
2 PsiBlast_PDB 74.4630% -65 - C1 -4FIN - ETTA_ECOLI -
50 Fugue 65.0821% -44 - C1 -3J16 - RLI1_YEAST -
25 HHSearch 61.2124% -0 - C- -2IW3 - EF3A_YEAST -
29 HHSearch 59.4021% -70 - C1 -3OZX - ? -
28 HHSearch 59.3721% -59 - C1 -1YQT - ? -
26 HHSearch 59.0920% -63 - C1 -3BK7 - ? -
9 PsiBlast_PDB 56.8122% -45 - C1 -3BK7 3.9 ?
27 HHSearch 55.4620% -41 * C1 *3J16 - RLI1_YEAST -
8 PsiBlast_PDB 54.7922% -41 - C1 -3J15 2.9 ?
43 HHSearch 53.7123%-108 - C1 -3TUI - METN_ECOLI -
36 HHSearch 53.7125%-105 - C1 -1Z47 - ? -
7 PsiBlast_PDB 52.5424% -40 - C1 -3OZX - ? -
45 HHSearch 52.1324% -97 - C1 -3RLF - MALK_ECOLI -
39 HHSearch 52.1222%-104 - C1 -1V43 - ? -
41 HHSearch 52.0926%-103 - C1 -2YYZ - ? -
5 PsiBlast_PDB 52.0824% -77 - C1 -2IW3 - EF3A_YEAST -
3 PsiBlast_PDB 51.9024% -76 - C1 -2IWH - EF3A_YEAST -
47 HHSearch 51.8723%-106 - C1 -3D31 - ? -
4 PsiBlast_PDB 51.6524% -78 - C1 -2IX3 - EF3A_YEAST -