@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1229: (2016-03-23 )
MVQHLTAEEIIQYISDAKKSTPIKVYLNGNFEGITYPESFKVFGSEQSKVIFCEADDWKPFYEAYGSQFEDIEIEMDRRNSAIPLKDLTNTNARIEPGAFIREQAIIEDGAVVMMGATINIGAVVGEGTMIDMNATLGGRATTGKNVHVGAGAVLAGVIEPPSASPVIIEDDVLIGANAVILEGVRVGKGAIVAAGAIVTQDVPAGAVVAGTPAKVIKQASEVQDTKKEIVAALRKLND

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_4(3TK8)
?
[Raw transfer]



EDO_B_16(3TK8)
?
[Raw transfer]



COA_D_4(2TDT)
DAPD_UNKP
[Raw transfer]



COA_D_4(3TDT)
DAPD_UNKP
[Raw transfer]



SCO_G_7(1KGQ)
DAPD_UNKP
[Raw transfer]



SCA_G_7(1KGT)
DAPD_UNKP
[Raw transfer]



EDO_C_26(3TK8)
?
[Raw transfer]
2 PsiBlast_PDB 93.5761%-145 - C3 -3CJ8 - DAPH_ENTFA -
25 PsiBlast_CBE 91.5959%-148 - C3 -3R8Y - DAPH_BACAN -
22 PsiBlast_CBE 89.9659%-151 - C3 -3R8Y - DAPH_BACAN -
1 PsiBlast_PDB 87.6759%-148 - C3 -3R8Y - DAPH_BACAN -
23 PsiBlast_CBE 87.2059%-147 - C3 -3R8Y - DAPH_BACAN -
24 PsiBlast_CBE 86.8659%-148 - C3 -3R8Y - DAPH_BACAN -
21 PsiBlast_CBE 85.1659%-149 - C3 -3R8Y - DAPH_BACAN -
132 HHSearch 83.3159%-149 - C3 -3R8Y - DAPH_BACAN -
134 HHSearch 64.7140%-151 - C3 -3GOS - DAPD_YERPE -
142 HHSearch 58.9440%-162 - C3 -3EG4 - DAPD_BRUSU -
5 PsiBlast_PDB 57.6633%-138 - C3 -3EG4 - DAPD_BRUSU -
135 HHSearch 54.5128%-166 - C3 -3IXC - ? -
49 PsiBlast_CBE 53.7533%-148 - C3 -4M99 - ? -
51 PsiBlast_CBE 53.4133%-148 - C3 -4M99 - ? -
157 Fugue 52.9924% -99 - C2 -1HV9 - GLMU_ECOLI -
156 Fugue 52.9021%-107 - C2 -4EAB - ? -
11 PsiBlast_PDB 52.8341%-148 - C3 -3BXY - DAPD_ECO57 -
159 Fugue 52.7120%-110 * C2 *1HM9 - GLMU_STRPN -
148 HHSearch 52.4230%-158 - C3 -3R1W - ? -
50 PsiBlast_CBE 52.4233%-146 - C3 -4M99 - ? -
10 PsiBlast_PDB 48.6741%-141 - C3 -3TDT 4.5 DAPD_UNKP
7 PsiBlast_PDB 48.0941%-138 - C3 -1KGQ 3.6 DAPD_UNKP
26 PsiBlast_CBE 47.9237%-135 - C3 -3TK8 2.3 ?
9 PsiBlast_PDB 47.8541%-136 - C3 -2TDT 4.3 DAPD_UNKP
4 PsiBlast_PDB 47.3537%-136 - C3 -3TK8 Error ?
8 PsiBlast_PDB 45.9741%-134 - C3 -1KGT 3.8 DAPD_UNKP