@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1289: (2016-03-24 )
MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLLQQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGRGRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPNDIYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLDRYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASNIWNRTLLFTENDKQFKGQAIDLDYDGYLIVRDEAGESHRLISADIDF

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BTX_A_2(4DQ2)
?
[Raw transfer]



BT5_A_2(3V8L)
?
[Raw transfer]



BT5_A_3(1WQW)
?
[Raw transfer]



32G_A_2(3V7R)
?
[Raw transfer]



BT5_A_2(3RKW)
?
[Raw transfer]



BT5_A_2(3RIR)
?
[Raw transfer]



BT5_B_4(2DKG)
?
[Raw transfer]



C77_A_2(3V7C)
?
[Raw transfer]



36F_A_2(3V7S)
?
[Raw transfer]



BT5_B_5(2DTI)
?
[Raw transfer]



BTN_A_2(3V8K)
?
[Raw transfer]



ATP_A_4(1X01)
?
[Raw transfer]



ADP_A_3(1WNL)
?
[Raw transfer]



ADP_A_3(1WNL)
?
[Raw transfer]



BTN_A_2(3RKY)
?
[Raw transfer]



ATP_A_3(3EFS)
?
[Raw transfer]



ATP_B_7(3EFS)
?
[Raw transfer]



BC4_A_2(4HA8)
?
[Raw transfer]



BTN_A_3(1WPY)
?
[Raw transfer]



BTN_B_7(3EFR)
?
[Raw transfer]



ADP_C_3(2DTH)
?
[Raw transfer]



BTN_A_3(3EFR)
?
[Raw transfer]
11 PsiBlast_PDB 89.48100%-117 - C2 -4DQ2 11.5 ?
5 PsiBlast_PDB 88.97100%-120 - C2 -3V8K 5.6 ?
12 PsiBlast_PDB 88.8899%-116 - C2 -4HA8 5.2 ?
1 PsiBlast_PDB 88.87100%-118 * C2 *3V7C 11.1 ?
3 PsiBlast_PDB 88.73100%-116 - C2 -3V7R 11.5 ?
8 PsiBlast_PDB 88.6199%-120 - C2 -3RKW 11.3 ?
6 PsiBlast_PDB 88.37100%-117 - C2 -3V8L 11.5 ?
10 PsiBlast_PDB 88.2099%-119 - C2 -3RKY 5.3 ?
7 PsiBlast_PDB 88.1999%-116 - C2 -3RIR 9.3 ?
2 PsiBlast_PDB 88.10100%-118 - C2 -3V7S 9.9 ?
4 PsiBlast_PDB 87.77100%-130 - C2 -3V8J - ? -
35 HHSearch 87.71100%-130 - C2 -3RKX - ? -
56 Fugue 87.5399%-130 - C2 -3RKX - ? -
9 PsiBlast_PDB 87.5299%-130 - C2 -3RKX - ? -
36 HHSearch 57.6924% -93 - C2 -1BIA - BIRA_ECOLI -
57 Fugue 53.7331% -85 - C2 -1WNL 7.6 ?
16 PsiBlast_PDB 52.7630% -93 - C2 -1X01 6.9 ?
13 PsiBlast_PDB 52.1730% -93 - C2 -1WNL 7.6 ?
39 HHSearch 51.7329% -89 - C2 -2EJ9 - BPL_METJA -
14 PsiBlast_PDB 51.3230% -96 - C2 -1WQ7 - ? -
18 PsiBlast_PDB 51.2730% -90 - C2 -2DTH 4.4 ?
15 PsiBlast_PDB 50.9830% -89 - C2 -1WQW 9.8 ?
20 PsiBlast_PDB 50.9630% -90 - C2 -1WPY 6.4 ?
19 PsiBlast_PDB 50.6930% -93 - C2 -2DTI 8.5 ?
17 PsiBlast_PDB 50.6430% -91 - C2 -2DKG 9.7 ?
23 PsiBlast_CBE 44.2733% -93 - C2 -3EFS 6.1 ?
24 PsiBlast_CBE 44.0833% -89 - C2 -3EFS 6.8 ?
25 PsiBlast_CBE 42.6933% -84 - C2 -3EFR 1.9 ?
26 PsiBlast_CBE 41.5333% -85 - C2 -3EFR 2.1 ?