@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1298: (2016-03-24 )
MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAHDSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEYNHKIAHGHAVMIGIIYQFIVANILFNSNHDIQHYINYLTKLGYPLETITDIDFETIYQYMLSDKKNDKQGVQMVLIKHFGDIVVQHIDQTTLQHACEQLKTYFK

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_8(1XAG)
AROB_STAAR
[Raw transfer]




NAD_A_5(1XAH)
AROB_STAAR
[Raw transfer]




NAD_A_3(3OKF)
AROB_VIBCH
[Raw transfer]




NAD_A_5(1XAH)
AROB_STAAR
[Raw transfer]




NAD_B_6(1XAH)
AROB_STAAR
[Raw transfer]




NAD_A_6(1DQS)
ARO1_EMENI
[Raw transfer]




NAD_A_3(3OKF)
AROB_VIBCH
[Raw transfer]




NAD_B_8(1DQS)
ARO1_EMENI
[Raw transfer]




NAD_B_12(3OKF)
AROB_VIBCH
[Raw transfer]




NAD_A_8(1NR5)
ARO1_EMENI
[Raw transfer]




NAD_A_5(1SG6)
ARO1_EMENI
[Raw transfer]




NAD_B_9(1NR5)
ARO1_EMENI
[Raw transfer]




NAD_A_7(1NVB)
ARO1_EMENI
[Raw transfer]




NAD_A_19(1NRX)
ARO1_EMENI
[Raw transfer]




NAD_B_6(1SG6)
ARO1_EMENI
[Raw transfer]




NAD_A_5(1SG6)
ARO1_EMENI
[Raw transfer]




NAD_B_20(1NRX)
ARO1_EMENI
[Raw transfer]




NAD_A_8(2GRU)
DOIS_BACCI
[Raw transfer]




NAD_B_10(2GRU)
DOIS_BACCI
[Raw transfer]




ADP_B_12(1NVF)
ARO1_EMENI
[Raw transfer]




ADP_B_7(1NVA)
ARO1_EMENI
[Raw transfer]




ADP_C_13(1NVF)
ARO1_EMENI
[Raw transfer]




ADP_A_6(1NVA)
ARO1_EMENI
[Raw transfer]




CRB_B_6(1XAI)
AROB_STAAR
[Raw transfer]




CRB_A_5(1XAI)
AROB_STAAR
[Raw transfer]




ADP_A_11(1NVF)
ARO1_EMENI
[Raw transfer]




CRB_A_9(1XAG)
AROB_STAAR
[Raw transfer]




CRB_A_6(1NVD)
ARO1_EMENI
[Raw transfer]




CRB_B_7(1NVD)
ARO1_EMENI
[Raw transfer]




CRB_B_9(1NVB)
ARO1_EMENI
[Raw transfer]




1 PsiBlast_PDB 99.1891%-133 - C3 -1XAG 8.4 AROB_STAAR
3 PsiBlast_PDB 97.0091%-132 - C3 -1XAI 4.6 AROB_STAAR
21 PsiBlast_CBE 96.9091%-133 - C3 -1XAI 4.4 AROB_STAAR
22 PsiBlast_CBE 94.4991%-141 - C3 -1XAH 9.8 AROB_STAAR
49 HHSearch 92.7291%-140 - C3 -1XAH 9.3 AROB_STAAR
2 PsiBlast_PDB 92.7291%-140 - C3 -1XAH 9.3 AROB_STAAR
4 PsiBlast_PDB 76.0933%-120 - C3 -3OKF 9.1 AROB_VIBCH
52 HHSearch 75.7133%-110 - C3 -3OKF 9.5 AROB_VIBCH
23 PsiBlast_CBE 75.4733%-125 - C3 -3OKF 8.6 AROB_VIBCH
51 HHSearch 72.5128% -99 - C3 -2GRU - DOIS_BACCI -
40 Fugue 72.0532%-115 - C3 -1UJN - ? -
55 HHSearch 71.3631%-109 - C3 -1SG6 9.8 ARO1_EMENI
54 HHSearch 70.9131%-107 - C3 -3QBE - AROB_MYCTU -
39 Fugue 68.9429% -96 - C3 -1DQS - ARO1_EMENI -
16 PsiBlast_PDB 67.8431%-103 - C3 -2GRU 7.7 DOIS_BACCI
38 PsiBlast_CBE 66.8831%-108 - C3 -2GRU 7.2 DOIS_BACCI
26 PsiBlast_CBE 64.3434% -87 - C3 -3ZOK - DHQS_ACTCH -
24 PsiBlast_CBE 64.3234% -88 - C3 -3ZOK - DHQS_ACTCH -
17 PsiBlast_PDB 64.2324%-101 - C3 -4P53 - ? -
5 PsiBlast_PDB 63.8334% -87 - C3 -3ZOK - DHQS_ACTCH -
33 PsiBlast_CBE 63.1634%-100 - C3 -1NVA 3.7 ARO1_EMENI
31 PsiBlast_CBE 61.8634% -83 - C3 -1NVD 5.2 ARO1_EMENI
10 PsiBlast_PDB 61.0634% -98 - C3 -1NVA 4.2 ARO1_EMENI
12 PsiBlast_PDB 60.6034% -83 - C3 -1NVD 5.3 ARO1_EMENI
36 PsiBlast_CBE 60.5934% -79 - C3 -1NR5 8.2 ARO1_EMENI
28 PsiBlast_CBE 60.5834% -84 - C3 -1NVF 4.0 ARO1_EMENI
8 PsiBlast_PDB 60.5734%-103 - C3 -1NRX 6.0 ARO1_EMENI
35 PsiBlast_CBE 60.4334%-100 - C3 -1NRX 5.5 ARO1_EMENI
14 PsiBlast_PDB 60.3734% -97 - C3 -1SG6 8.5 ARO1_EMENI
6 PsiBlast_PDB 60.3734% -80 - C3 -1DQS 9.0 ARO1_EMENI
29 PsiBlast_CBE 60.3634% -81 - C3 -1NVF 3.9 ARO1_EMENI
13 PsiBlast_PDB 60.1734% -82 - C3 -1NVF 3.7 ARO1_EMENI
32 PsiBlast_CBE 60.1634% -76 - C3 -1NVB 4.7 ARO1_EMENI
11 PsiBlast_PDB 60.1134% -76 - C3 -1NVB 6.9 ARO1_EMENI
27 PsiBlast_CBE 60.0234%-101 - C3 -1SG6 8.5 ARO1_EMENI
7 PsiBlast_PDB 60.0234% -76 - C3 -1NR5 8.9 ARO1_EMENI
37 PsiBlast_CBE 58.5934% -78 - C3 -1DQS 9.0 ARO1_EMENI