@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1301: (2016-03-24 )
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE

Atome Classification :

(68 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UDP_D_13(3Q8V)
NDK_STAAC
[Raw transfer]




GTP_B_5(3Q86)
NDK_STAAC
[Raw transfer]




GTP_A_3(3Q86)
NDK_STAAC
[Raw transfer]




DGT_H_8(1S59)
NDK2_ARATH
[Raw transfer]




ADP_A_8(2BEF)
NDKC_DICDI
[Raw transfer]




GDP_A_8(2DXE)
NDK_PYRHO
[Raw transfer]




ADP_D_12(3Q8U)
NDK_STAAC
[Raw transfer]




TYD_A_3(1NDC)
NDKC_DICDI
[Raw transfer]




ADP_A_8(1KDN)
NDKC_DICDI
[Raw transfer]




ADP_E_14(3Q8U)
NDK_STAAC
[Raw transfer]




ADP_C_12(1KDN)
NDKC_DICDI
[Raw transfer]




UDP_B_11(3Q8V)
NDK_STAAC
[Raw transfer]




ADP_G_7(1ZS6)
NDK3_HUMAN
[Raw transfer]




ADP_C_12(2BEF)
NDKC_DICDI
[Raw transfer]




ADP_G_7(1ZS6)
NDK3_HUMAN
[Raw transfer]




ADP_A_7(2HVE)
NDKA_HUMAN
[Raw transfer]




ADP_A_7(2HVD)
NDKA_HUMAN
[Raw transfer]




CDP_B_10(3Q89)
NDK_STAAC
[Raw transfer]




ADP_B_10(2BEF)
NDKC_DICDI
[Raw transfer]




ADP_B_10(1KDN)
NDKC_DICDI
[Raw transfer]




ADP_K_11(1ZS6)
NDK3_HUMAN
[Raw transfer]




ADP_A_4(1NDP)
NDKC_DICDI
[Raw transfer]




AZD_B_7(1LWX)
NDKC_DICDI
[Raw transfer]




ADP_H_24(3Q8Y)
NDK_STAAC
[Raw transfer]




ADP_B_9(3Q8U)
NDK_STAAC
[Raw transfer]




ADP_F_16(3Q8U)
NDK_STAAC
[Raw transfer]




ADP_A_7(3Q8U)
NDK_STAAC
[Raw transfer]




UDP_A_9(3Q8V)
NDK_STAAC
[Raw transfer]




3AN_B_9(1HIY)
NDKC_DICDI
[Raw transfer]




ADP_D_15(3Q8Y)
NDK_STAAC
[Raw transfer]




ADP_A_4(1NDP)
NDKC_DICDI
[Raw transfer]




ADP_A_7(3Q8U)
NDK_STAAC
[Raw transfer]




ADP_C_11(3Q8U)
NDK_STAAC
[Raw transfer]




ADP_B_5(1NDP)
NDKC_DICDI
[Raw transfer]




ADP_C_11(2HVE)
NDKA_HUMAN
[Raw transfer]




3AN_A_7(1HIY)
NDKC_DICDI
[Raw transfer]




ADP_B_9(2HVD)
NDKA_HUMAN
[Raw transfer]




TBD_A_7(1F6T)
NDKC_DICDI
[Raw transfer]




TBD_C_9(1F6T)
NDKC_DICDI
[Raw transfer]




CDP_E_12(3Q89)
NDK_STAAC
[Raw transfer]




ADP_C_11(2HVD)
NDKA_HUMAN
[Raw transfer]




ADP_I_9(1ZS6)
NDK3_HUMAN
[Raw transfer]




ADP_E_18(3Q8Y)
NDK_STAAC
[Raw transfer]




3AN_C_11(1HIY)
NDKC_DICDI
[Raw transfer]




POP_H_8(1B99)
NDKC_DICDI
[Raw transfer]




ADP_A_9(3Q8Y)
NDK_STAAC
[Raw transfer]




AZD_C_8(1LWX)
NDKC_DICDI
[Raw transfer]




AZD_A_6(1LWX)
NDKC_DICDI
[Raw transfer]




ADP_B_9(2HVE)
NDKA_HUMAN
[Raw transfer]




TBD_B_8(1F6T)
NDKC_DICDI
[Raw transfer]




SON_H_8(1S5Z)
NDKC_DICDI
[Raw transfer]




PPS_A_4(1BUX)
NDKC_DICDI
[Raw transfer]




PPS_B_5(1BUX)
NDKC_DICDI
[Raw transfer]




TYD_A_3(3EVO)
NDK_MIMIV
[Raw transfer]




PPS_C_6(1BUX)
NDKC_DICDI
[Raw transfer]




ADP_G_22(3Q8Y)
NDK_STAAC
[Raw transfer]




DGI_G_7(1S59)
NDK2_ARATH
[Raw transfer]




CMP_R_3(1NHK)
NDK_MYXXA
[Raw transfer]




FUP_G_7(1B99)
NDKC_DICDI
[Raw transfer]




POP_L_12(1B99)
NDKC_DICDI
[Raw transfer]




ADP_B_11(3Q8Y)
NDK_STAAC
[Raw transfer]




POP_I_9(1B99)
NDKC_DICDI
[Raw transfer]




POP_J_10(1B99)
NDKC_DICDI
[Raw transfer]




POP_K_11(1B99)
NDKC_DICDI
[Raw transfer]




22 PsiBlast_CBE 98.14100%-113 - C8 -3Q8Y 5.2 NDK_STAAC
28 PsiBlast_CBE 97.42100%-116 - C8 -3Q8V 5.1 NDK_STAAC
25 PsiBlast_CBE 97.26100%-112 - C8 -3Q8Y 5.5 NDK_STAAC
23 PsiBlast_CBE 97.01100%-113 - C8 -3Q8Y - NDK_STAAC -
29 PsiBlast_CBE 96.98100%-115 - C8 -3Q8V 4.7 NDK_STAAC
37 PsiBlast_CBE 96.86100%-114 - C8 -3Q86 6.9 NDK_STAAC
35 PsiBlast_CBE 96.72100%-112 - C8 -3Q89 4.4 NDK_STAAC
31 PsiBlast_CBE 96.72100%-111 - C8 -3Q8U 6.1 NDK_STAAC
27 PsiBlast_CBE 96.59100%-114 - C8 -3Q8Y 3.7 NDK_STAAC
32 PsiBlast_CBE 96.39100%-112 - C8 -3Q8U 6.6 NDK_STAAC
6 PsiBlast_PDB 96.33100%-112 - C8 -3Q8Y 5.4 NDK_STAAC
36 PsiBlast_CBE 96.26100%-113 - C8 -3Q89 5.2 NDK_STAAC
26 PsiBlast_CBE 96.22100%-110 - C8 -3Q8Y - NDK_STAAC -
33 PsiBlast_CBE 96.20100%-111 - C8 -3Q8U 6.3 NDK_STAAC
5 PsiBlast_PDB 96.12100%-112 - C8 -3Q8V 5.2 NDK_STAAC
3 PsiBlast_PDB 96.12100%-113 - C8 -3Q89 - NDK_STAAC -
1 PsiBlast_PDB 95.81100%-112 - C8 -3Q83 - NDK_STAAC -
21 PsiBlast_CBE 95.38100%-112 - C8 -3Q8Y 4.5 NDK_STAAC
24 PsiBlast_CBE 95.29100%-113 - C8 -3Q8Y 5.5 NDK_STAAC
102 HHSearch 95.15100%-109 - C8 -3Q8U 6.9 NDK_STAAC
4 PsiBlast_PDB 95.15100%-109 - C8 -3Q8U 6.9 NDK_STAAC
30 PsiBlast_CBE 95.08100%-110 - C8 -3Q8U 6.2 NDK_STAAC
2 PsiBlast_PDB 94.83100%-110 - C8 -3Q86 6.8 NDK_STAAC
34 PsiBlast_CBE 94.55100%-106 - C8 -3Q8U 6.5 NDK_STAAC
121 HHSearch 82.6456%-109 - C8 -2DXE 6.9 NDK_PYRHO
50 PsiBlast_CBE 80.6254%-105 - C8 -1ZS6 6.5 NDK3_HUMAN
49 PsiBlast_CBE 79.8054%-103 - C8 -1ZS6 6.6 NDK3_HUMAN
68 PsiBlast_CBE 79.2456%-100 - C8 -1HIY 5.2 NDKC_DICDI
19 PsiBlast_PDB 79.2056% -99 - C8 -2BEF 7.3 NDKC_DICDI
85 PsiBlast_CBE 79.0451%-103 - C8 -2HVD 6.4 NDKA_HUMAN
51 PsiBlast_CBE 78.8751%-105 - C8 -1S59 4.5 NDK2_ARATH
88 PsiBlast_CBE 78.6951%-107 - C8 -2HVE 5.9 NDKA_HUMAN
14 PsiBlast_PDB 78.6554%-105 - C8 -1ZS6 6.8 NDK3_HUMAN
64 PsiBlast_CBE 78.6456% -99 - C8 -1NDC 7.0 NDKC_DICDI
66 PsiBlast_CBE 78.6056%-101 - C8 -1KDN 6.4 NDKC_DICDI
105 HHSearch 78.5154%-104 - C8 -1ZS6 6.8 NDK3_HUMAN
78 PsiBlast_CBE 78.4856% -99 - C8 -1B99 2.0 NDKC_DICDI
59 PsiBlast_CBE 78.2456% -99 - C8 -2BEF 6.6 NDKC_DICDI
70 PsiBlast_CBE 78.1656% -99 - C8 -1F6T 6.4 NDKC_DICDI
18 PsiBlast_PDB 78.0956%-100 - C8 -1KDN 7.4 NDKC_DICDI
77 PsiBlast_CBE 78.0356%-103 - C8 -1B99 3.7 NDKC_DICDI
58 PsiBlast_CBE 77.7656%-100 - C8 -2BEF 7.0 NDKC_DICDI
16 PsiBlast_PDB 77.7051% -98 - C8 -1S59 6.0 NDK2_ARATH
90 PsiBlast_CBE 77.6151%-101 - C8 -2HVE 6.1 NDKA_HUMAN
79 PsiBlast_CBE 77.6056% -97 - C8 -1B99 3.2 NDKC_DICDI
93 PsiBlast_CBE 77.5956% -99 - C8 -1LWX 5.4 NDKC_DICDI
83 PsiBlast_CBE 77.5451%-102 - C8 -2HVD 6.9 NDKA_HUMAN
65 PsiBlast_CBE 77.5256% -96 - C8 -1KDN 6.8 NDKC_DICDI
62 PsiBlast_CBE 77.4556%-104 - C8 -1S5Z 5.5 NDKC_DICDI
20 PsiBlast_PDB 77.4056% -99 - C8 -1BUX 6.3 NDKC_DICDI
73 PsiBlast_CBE 77.0956% -99 - C8 -1BUX 5.2 NDKC_DICDI
67 PsiBlast_CBE 77.0656%-103 - C8 -1HIY 5.6 NDKC_DICDI
63 PsiBlast_CBE 77.0156% -98 - C8 -1NDP 7.6 NDKC_DICDI
75 PsiBlast_CBE 76.9256% -95 - C8 -1B99 3.4 NDKC_DICDI
84 PsiBlast_CBE 76.7851% -98 - C8 -2HVD 6.8 NDKA_HUMAN
80 PsiBlast_CBE 76.5456% -96 - C8 -1B99 5.1 NDKC_DICDI
71 PsiBlast_CBE 76.4956% -96 - C8 -1F6T 6.8 NDKC_DICDI
94 PsiBlast_CBE 76.4856%-101 - C8 -1LWX 5.5 NDKC_DICDI
74 PsiBlast_CBE 76.4456%-101 - C8 -1BUX 5.5 NDKC_DICDI
92 PsiBlast_CBE 75.9256% -99 - C8 -1LWX 5.1 NDKC_DICDI
17 PsiBlast_PDB 75.8656% -93 - C8 -1NDP 7.1 NDKC_DICDI
122 Fugue 75.7656% -92 - C8 -1NDP 7.1 NDKC_DICDI
72 PsiBlast_CBE 75.4756% -94 - C8 -1F6T 6.9 NDKC_DICDI
89 PsiBlast_CBE 75.0951% -96 - C8 -2HVE 6.8 NDKA_HUMAN
76 PsiBlast_CBE 74.9456% -98 - C8 -1B99 3.2 NDKC_DICDI
69 PsiBlast_CBE 74.3156% -93 - C8 -1HIY 5.5 NDKC_DICDI
120 HHSearch 74.1643%-111 - C8 -3EVO 4.3 NDK_MIMIV
117 HHSearch 72.8647%-103 - C8 -1NHK 5.6 NDK_MYXXA