@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1302: (2016-03-24 )
MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2DE_D_13(3AQC)
HEXB_MICLU
[Raw transfer]




2DE_B_8(3AQC)
HEXB_MICLU
[Raw transfer]




RIS_B_12(1RQJ)
ISPA_ECOLI
[Raw transfer]




RIS_A_10(1RQJ)
ISPA_ECOLI
[Raw transfer]




DST_D_11(3KRO)
?
[Raw transfer]




DST_D_11(3KRF)
?
[Raw transfer]




DST_A_6(3OAB)
?
[Raw transfer]




IPE_A_4(4LLT)
?
[Raw transfer]




DST_D_6(3OAC)
?
[Raw transfer]




IPE_A_3(3WJO)
?
[Raw transfer]




IPE_B_9(4LLT)
?
[Raw transfer]




DST_D_11(3OAB)
?
[Raw transfer]




GPP_D_9(3KRP)
?
[Raw transfer]




PPV_A_6(3KRF)
?
[Raw transfer]




PPV_A_5(3KRP)
?
[Raw transfer]




DST_A_10(1RQI)
ISPA_ECOLI
[Raw transfer]




IPE_D_7(3KRC)
?
[Raw transfer]




DST_B_9(1RQI)
ISPA_ECOLI
[Raw transfer]




GOL_A_5(3Q2Q)
?
[Raw transfer]




GOL_A_2(3LK5)
?
[Raw transfer]




IPE_A_3(4LLS)
?
[Raw transfer]




CIT_A_3(3PKO)
?
[Raw transfer]




IPE_B_7(4LFE)
?
[Raw transfer]




IPE_B_8(4LLS)
?
[Raw transfer]




CIT_A_3(3PKO)
?
[Raw transfer]




IPR_A_9(1RQJ)
ISPA_ECOLI
[Raw transfer]




IPE_A_4(4LFG)
?
[Raw transfer]




IPE_B_9(4LFG)
?
[Raw transfer]




IPR_B_11(1RQJ)
ISPA_ECOLI
[Raw transfer]




IPE_A_4(3WJO)
?
[Raw transfer]




IPE_A_2(3Q2Q)
?
[Raw transfer]




IPE_A_5(3KRC)
?
[Raw transfer]




POP_A_3(3OYR)
?
[Raw transfer]




IPE_A_5(3KRO)
?
[Raw transfer]




PPV_A_5(3KRF)
?
[Raw transfer]




1 PsiBlast_PDB 93.6243% -80 - C1 -3AQB - HEXB_MICLU -
21 PsiBlast_CBE 93.2443% -82 - C1 -3AQC 4.3 HEXB_MICLU
2 PsiBlast_PDB 92.1643% -78 - C1 -3AQC 4.0 HEXB_MICLU
22 PsiBlast_CBE 91.6443% -79 - C1 -3AQB - HEXB_MICLU -
69 Fugue 88.7743% -71 - C1 -3AQB - HEXB_MICLU -
47 HHSearch 88.6942% -76 - C1 -3AQB - HEXB_MICLU -
50 HHSearch 80.0031% -73 * C1 *1WY0 - ? -
10 PsiBlast_PDB 74.9830% -71 - C1 -3N3D - ? -
4 PsiBlast_PDB 74.1434% -66 - C1 -1WY0 - ? -
11 PsiBlast_PDB 73.7330% -68 - C1 -3PKO 3.2 ?
51 HHSearch 72.9230% -69 - C1 -3PKO 3.2 ?
49 HHSearch 72.1730% -73 - C1 -3LMD - ? -
52 HHSearch 71.3222% -68 - C1 -3NF2 - ? -
44 HHSearch 70.6827% -89 - C1 -3OYR - ? -
5 PsiBlast_PDB 70.2030% -72 - C1 -3WJO 3.6 ?
3 PsiBlast_PDB 69.8031% -75 - C1 -4LOB - ? -
8 PsiBlast_PDB 68.5627% -77 - C1 -4JYX - ? -
60 HHSearch 68.4933% -81 - C1 -1RTR - ? -
77 Fugue 67.4924% -81 - C1 -3OYR - ? -
48 HHSearch 66.8827% -76 - C1 -3APZ - SPS3_ARATH -
18 PsiBlast_PDB 49.4931% -58 - C1 -3OAB 3.9 ?
16 PsiBlast_PDB 49.2631% -57 - C1 -3KRO 3.2 ?
17 PsiBlast_PDB 48.0631% -56 - C1 -3KRP 3.4 ?
15 PsiBlast_PDB 48.0531% -57 - C1 -3KRF 3.2 ?
7 PsiBlast_PDB 47.5134% -81 - C1 -3Q2Q 3.4 ?
14 PsiBlast_PDB 46.3831% -58 - C1 -3KRC 2.7 ?
28 PsiBlast_CBE 46.3731% -56 - C1 -3KRC 3.8 ?
12 PsiBlast_PDB 46.1330% -86 - C1 -3OYR 3.4 ?
27 PsiBlast_CBE 45.6331% -46 - C1 -3KRF 3.4 ?
24 PsiBlast_CBE 44.1131% -43 - C1 -3OAB 2.8 ?
23 PsiBlast_CBE 43.6931% -44 - C1 -3OAC 2.9 ?
26 PsiBlast_CBE 43.2231% -44 - C1 -3KRO 3.2 ?
25 PsiBlast_CBE 42.1831% -48 - C1 -3KRP 4.4 ?
32 PsiBlast_CBE 31.2432% -39 - C1 -4LFE 5.1 ?
30 PsiBlast_CBE 30.0832% -37 - C1 -4LFG 5.2 ?
31 PsiBlast_CBE 29.8132% -37 - C1 -4LFG 5.4 ?
35 PsiBlast_CBE 28.9132% -37 - C1 -4LLS 5.3 ?
33 PsiBlast_CBE 27.8632% -36 - C1 -4LLT 2.8 ?
36 PsiBlast_CBE 27.2232% -37 - C1 -4LLS 5.3 ?
34 PsiBlast_CBE 26.2632% -35 - C1 -4LLT 3.1 ?
42 PsiBlast_CBE 17.8732% -28 - C1 -1RQI 3.9 ISPA_ECOLI
40 PsiBlast_CBE 17.1032% -28 - C1 -1RQJ 6.0 ISPA_ECOLI
39 PsiBlast_CBE 16.7032% -30 - C1 -1RQJ 5.6 ISPA_ECOLI
41 PsiBlast_CBE 16.2032% -29 - C1 -1RQI 3.4 ISPA_ECOLI