@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1339: (2016-03-24 )
MVTIKDVALKAGVSPSTVSRVIKGNKRISEATISKVKKVMEELNYFPNTAARTLITNQTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKENDPIKQMLIDESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIEQGVDELIFITEKGNFEVSKDRIQGFETVASQFNLDYQIIETSNEREVILNYMQNLHTRLKDPNIKQAIISLDAMLHLAILSVLYELNIEIPKDVMTATFNDSYLTEIASPPQTCIDIKPRMLGQQAGSAILNILKNKAQDVIELVIIDTELKIRKSTQR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_B_6(3HCW)
?
[Raw transfer]



GOL_A_4(3HCW)
?
[Raw transfer]
21 PsiBlast_CBE 89.4499%-115 - C1 -3HCW 3.1 ?
1 PsiBlast_PDB 89.4099%-116 - C1 -3HCW 2.2 ?
5 PsiBlast_PDB 66.0625% -96 - C1 -1QP7 - PURR_ECOLI -
4 PsiBlast_PDB 65.7725% -97 - C1 -1BDH - PURR_ECOLI -
7 PsiBlast_PDB 65.3425% -95 - C1 -1QQB - PURR_ECOLI -
6 PsiBlast_PDB 65.3025% -96 - C1 -1QQA - PURR_ECOLI -
17 PsiBlast_PDB 65.1325% -97 - C1 -1QP4 - PURR_ECOLI -
16 PsiBlast_PDB 65.0225%-100 - C1 -1QP0 - PURR_ECOLI -
3 PsiBlast_PDB 64.8625% -98 - C1 -1JH9 - PURR_ECOLI -
11 PsiBlast_PDB 64.4125% -97 - C1 -2PUD - PURR_ECOLI -
12 PsiBlast_PDB 64.3025% -96 - C1 -1JFT - PURR_ECOLI -
8 PsiBlast_PDB 64.2625% -96 - C1 -2PUA - PURR_ECOLI -
18 PsiBlast_PDB 64.1225% -97 - C1 -1QPZ - PURR_ECOLI -
19 PsiBlast_PDB 64.0925% -95 - C1 -1ZAY - PURR_ECOLI -
13 PsiBlast_PDB 64.0625% -97 - C1 -1PNR - PURR_ECOLI -
20 PsiBlast_PDB 63.9925% -97 - C1 -2PUE - PURR_ECOLI -
15 PsiBlast_PDB 63.9925% -95 - C1 -1WET - PURR_ECOLI -
14 PsiBlast_PDB 63.8725% -95 - C1 -1BDI - PURR_ECOLI -
9 PsiBlast_PDB 63.5825% -95 - C1 -2PUB - PURR_ECOLI -
10 PsiBlast_PDB 63.5725% -96 - C1 -2PUC - PURR_ECOLI -