@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1348: (2016-03-24 )
MIDYKSLGLSEEDLKVIYKWMDLGRKIDERLWLLNRAGKIPFVVSGQGQEATQIGMAYALEEGDITAPYYRDLAFVTYMGISAYDTFLSAFGKKDDVNSGGKQMPSHFSSRAKNILSQSSPVATQIPHAVGAALALKMDGKKKIATATVGEGSSNQGDFHEGLNFAGVHKLPFVCVIINNKYAISVPDSLQYAAEKLSDRALGYGIHGEQVDGNDPLAMYKAMKEARDRAISGQGSTLIEAVTSRMTAHSSDDDDQYRTKEEREALKKADCNEKFKKELLSAGIIDDAWLAEIEAEHKDIINKATKAAEDAPYPSVEEAYAFVYEEGSLN

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TDP_A_6(1DTW)
ODBA_HUMAN
[Raw transfer]




THY_A_4(2BEV)
ODBA_HUMAN
[Raw transfer]




TZD_A_3(2BFF)
ODBA_HUMAN
[Raw transfer]




THW_A_4(2BEW)
ODBA_HUMAN
[Raw transfer]




THV_A_6(2BEU)
ODBA_HUMAN
[Raw transfer]




WWF_A_4(1WCI)
ODBA_HUMAN
[Raw transfer]




TDP_A_5(1OLX)
ODBA_HUMAN
[Raw transfer]




TDP_A_6(1U5B)
ODBA_HUMAN
[Raw transfer]




TDP_A_6(1DTW)
ODBA_HUMAN
[Raw transfer]




TDP_A_6(2BFB)
ODBA_HUMAN
[Raw transfer]




TDP_A_7(1X7Z)
ODBA_HUMAN
[Raw transfer]




TZD_A_5(2BFC)
ODBA_HUMAN
[Raw transfer]




TDP_A_6(2BFE)
ODBA_HUMAN
[Raw transfer]




TDP_A_10(1V11)
ODBA_HUMAN
[Raw transfer]




TDP_A_3(1V1M)
ODBA_HUMAN
[Raw transfer]




TDP_A_7(1X7X)
ODBA_HUMAN
[Raw transfer]




TDP_A_9(1V16)
ODBA_HUMAN
[Raw transfer]




TDP_A_5(1OLU)
ODBA_HUMAN
[Raw transfer]




TDP_A_7(1X7Y)
ODBA_HUMAN
[Raw transfer]




TDP_A_7(1X7W)
ODBA_HUMAN
[Raw transfer]




TDP_A_7(1X80)
ODBA_HUMAN
[Raw transfer]




26 PsiBlast_CBE 93.4038% -59 - C5 -3DUF - ODPA_GEOSE -
29 PsiBlast_CBE 93.0338% -58 - C5 -1W85 - ODPA_GEOSE -
32 PsiBlast_CBE 92.7938% -56 - C5 -3DVA - ODPA_GEOSE -
27 PsiBlast_CBE 92.7338% -61 - C5 -1W85 - ODPA_GEOSE -
66 HHSearch 92.6839% -56 * C5 *1W85 - ODPA_GEOSE -
25 PsiBlast_CBE 92.6438% -57 - C5 -3DUF - ODPA_GEOSE -
24 PsiBlast_CBE 92.6338% -57 - C5 -3DUF - ODPA_GEOSE -
30 PsiBlast_CBE 92.3738% -58 - C5 -3DVA - ODPA_GEOSE -
7 PsiBlast_PDB 92.2737% -49 - C5 -1UMB - ODBA_THET8 -
9 PsiBlast_PDB 92.1937% -49 - C5 -1UMD - ODBA_THET8 -
1 PsiBlast_PDB 92.0838% -57 - C5 -3DUF - ODPA_GEOSE -
37 PsiBlast_CBE 91.9937% -49 - C5 -1UMC - ODBA_THET8 -
4 PsiBlast_PDB 91.7738% -54 - C5 -3DVA - ODPA_GEOSE -
8 PsiBlast_PDB 91.7237% -50 - C5 -1UMC - ODBA_THET8 -
3 PsiBlast_PDB 91.7138% -60 - C5 -1W85 - ODPA_GEOSE -
54 Fugue 91.6135% -53 - C5 -1DTW 5.5 ODBA_HUMAN
67 HHSearch 91.4735% -50 - C5 -1UMD - ODBA_THET8 -
36 PsiBlast_CBE 91.4037% -48 - C5 -1UMD - ODBA_THET8 -
38 PsiBlast_CBE 91.1937% -50 - C5 -1UMB - ODBA_THET8 -
28 PsiBlast_CBE 90.0338% -63 - C5 -1W85 - ODPA_GEOSE -
41 PsiBlast_CBE 88.1735% -52 - C5 -2BFF 6.5 ODBA_HUMAN
13 PsiBlast_PDB 87.7835% -54 - C5 -1WCI 7.3 ODBA_HUMAN
12 PsiBlast_PDB 87.1135% -54 - C5 -1U5B 6.8 ODBA_HUMAN
15 PsiBlast_PDB 87.0735% -51 - C5 -2BEV 7.4 ODBA_HUMAN
16 PsiBlast_PDB 86.8935% -51 - C5 -2BEW 8.3 ODBA_HUMAN
10 PsiBlast_PDB 86.8835% -53 - C5 -1DTW 5.5 ODBA_HUMAN
11 PsiBlast_PDB 86.7635% -51 - C5 -1OLX 6.6 ODBA_HUMAN
20 PsiBlast_PDB 86.6735% -51 - C5 -1X7Z 6.4 ODBA_HUMAN
14 PsiBlast_PDB 86.6635% -51 - C5 -2BEU 7.0 ODBA_HUMAN
46 PsiBlast_CBE 85.7735% -56 - C5 -1V16 6.1 ODBA_HUMAN
50 PsiBlast_CBE 85.5235% -58 - C5 -1V11 5.9 ODBA_HUMAN
43 PsiBlast_CBE 85.2835% -59 - C5 -1X7X 6.2 ODBA_HUMAN
42 PsiBlast_CBE 85.2835% -59 - C5 -1X7W 6.2 ODBA_HUMAN
47 PsiBlast_CBE 85.2635% -59 - C5 -2BFB 6.3 ODBA_HUMAN
19 PsiBlast_PDB 85.1335% -58 - C5 -1X80 5.8 ODBA_HUMAN
18 PsiBlast_PDB 84.8135% -56 - C5 -1X7Y 5.9 ODBA_HUMAN
49 PsiBlast_CBE 84.7134% -57 - C5 -2BFC 5.7 ODBA_HUMAN
48 PsiBlast_CBE 84.6034% -57 - C5 -2BFE 5.4 ODBA_HUMAN
51 PsiBlast_CBE 84.5434% -57 - C5 -1V1M 5.8 ODBA_HUMAN
45 PsiBlast_CBE 84.4035% -59 - C5 -1OLU 5.8 ODBA_HUMAN