@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1349: (2016-03-24 )
MSEKQYDLVVLGGGTAGYVAAIRASQLGKKVAIVERQLLGGTCLHKGCIPTKSLLKSAEVFQTVKQAAMFGVDVKDANVNFENMLARKEDIINQMYQGVKHLMQHNHIDIYNGTGRILGTSIFSPQSGTISVEYEDGESDLLPNQFVLIATGSSPAELPFLSFDHDKILSSDDILSLKTLPSSIGIIGGGVIGMEFASLMIDLGVDVTVIEAGERILPTESKQASQLLKKSLSARGVKFYEGIKLSENDINVNEDGVTFEISSDIIKVDKVLLSIGRKPNTSDIGLNNTKIKLSTSGHILTNEFQQTEDKHIYAAGDCIGKLQLAHVGSKEGVVAVDHMFEGNPIPVNYNMMPKCIYSQPEIASIGLNIEQAKAEGMKVKSFKVPFKAIGKAVIDSHDANEGYSEMVIDQSTEEIVGINMIGPHVTELINEASLLQFMNGSALELGLTTHAHPSISEVLMELGLKAESRAIHV

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_8(2YQU)
?
[Raw transfer]




FAD_A_7(2YQU)
?
[Raw transfer]




FAD_A_3(3URH)
?
[Raw transfer]




FAD_A_7(2YQU)
?
[Raw transfer]




FAD_A_4(1V59)
DLDH_YEAST
[Raw transfer]




FAD_C_3(1OJT)
?
[Raw transfer]




FAD_B_5(1EBD)
DLDH1_GEOSE
[Raw transfer]




FAD_A_3(3URH)
?
[Raw transfer]




FAD_B_6(2EQ7)
?
[Raw transfer]




FAD_B_4(3LAD)
DLDH_AZOVI
[Raw transfer]




FAD_B_4(1LPF)
DLDH_PSEFL
[Raw transfer]




FAD_C_3(1OJT)
?
[Raw transfer]




FAD_A_3(2A8X)
DLDH_MYCTU
[Raw transfer]




FAD_C_3(1BHY)
?
[Raw transfer]




FAD_A_4(1EBD)
DLDH1_GEOSE
[Raw transfer]




FAD_A_4(2EQ7)
?
[Raw transfer]




FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]




FAD_C_3(1JEH)
DLDH_YEAST
[Raw transfer]




FAD_A_4(1EBD)
DLDH1_GEOSE
[Raw transfer]




FAD_B_4(2QAE)
DLDH_TRYCR
[Raw transfer]




FAD_A_3(4JDR)
DLDH_ECOLI
[Raw transfer]




FAD_A_3(3II4)
DLDH_MYCTU
[Raw transfer]




FAD_A_4(1V59)
DLDH_YEAST
[Raw transfer]




FAD_A_3(3LAD)
DLDH_AZOVI
[Raw transfer]




FAD_B_11(4JDR)
DLDH_ECOLI
[Raw transfer]




FAD_D_4(1JEH)
DLDH_YEAST
[Raw transfer]




FAD_B_5(3II4)
DLDH_MYCTU
[Raw transfer]




FAD_B_5(1V59)
DLDH_YEAST
[Raw transfer]




FAD_A_3(2QAE)
DLDH_TRYCR
[Raw transfer]




NAD_E_5(1LVL)
DLDH1_PSEPU
[Raw transfer]




3II_A_4(3II4)
DLDH_MYCTU
[Raw transfer]




3II_B_6(3II4)
DLDH_MYCTU
[Raw transfer]




113 HHSearch 91.8435% -86 - C2 -2A8X 12.1 DLDH_MYCTU
117 HHSearch 91.4637% -83 - C2 -2YQU 12.2 ?
103 HHSearch 91.2538% -88 - C2 -3URH 12.1 ?
27 PsiBlast_CBE 90.5334% -92 - C2 -1ZY8 - DLDH_HUMAN -
109 HHSearch 90.4235% -86 - C2 -2EQ6 - ? -
47 PsiBlast_CBE 90.3934% -90 - C2 -2F5Z - DLDH_HUMAN -
54 PsiBlast_CBE 90.1734% -90 - C2 -1ZMD - DLDH_HUMAN -
31 PsiBlast_CBE 89.9134% -91 - C2 -1ZY8 - DLDH_HUMAN -
2 PsiBlast_PDB 89.9136% -80 - C2 -2YQU 12.2 ?
104 HHSearch 89.6035% -80 * C2 *2QAE 12.3 DLDH_TRYCR
34 PsiBlast_CBE 89.4734% -89 - C2 -1ZY8 - DLDH_HUMAN -
5 PsiBlast_PDB 89.4336% -83 - C2 -3URH 11.9 ?
65 PsiBlast_CBE 89.2836% -82 - C2 -3II4 12.3 DLDH_MYCTU
21 PsiBlast_CBE 89.2836% -80 - C2 -2YQU 12.3 ?
53 PsiBlast_CBE 89.2734% -89 - C2 -1ZMD - DLDH_HUMAN -
26 PsiBlast_CBE 89.1834% -89 - C2 -1ZY8 - DLDH_HUMAN -
12 PsiBlast_PDB 89.1034% -87 - C2 -2F5Z - DLDH_HUMAN -
30 PsiBlast_CBE 89.0034% -90 - C2 -1ZY8 - DLDH_HUMAN -
88 PsiBlast_CBE 88.8531% -91 - C2 -1LVL 6.5 DLDH1_PSEPU
11 PsiBlast_PDB 88.7934% -93 - C2 -1ZMD - DLDH_HUMAN -
115 HHSearch 88.7434% -90 - C2 -1EBD 12.6 DLDH1_GEOSE
23 PsiBlast_CBE 87.8032% -87 - C2 -3LAD 12.3 DLDH_AZOVI
1 PsiBlast_PDB 87.3436% -80 - C2 -2EQ7 12.6 ?
22 PsiBlast_CBE 87.2036% -80 - C2 -2EQ7 12.7 ?
102 HHSearch 87.0334% -88 - C2 -3LAD 11.4 DLDH_AZOVI
108 HHSearch 86.3135% -80 - C2 -1V59 13.0 DLDH_YEAST
35 PsiBlast_CBE 85.2834% -85 - C2 -1EBD 11.6 DLDH1_GEOSE
19 PsiBlast_PDB 85.0635% -77 - C2 -1JEH 13.2 DLDH_YEAST
13 PsiBlast_PDB 84.7336% -80 - C2 -3II4 12.4 DLDH_MYCTU
24 PsiBlast_CBE 84.5732% -85 - C2 -1LPF 11.6 DLDH_PSEFL
20 PsiBlast_PDB 84.3435% -77 - C2 -1V59 12.7 DLDH_YEAST
8 PsiBlast_PDB 84.3234% -86 - C2 -1EBD 12.4 DLDH1_GEOSE
78 PsiBlast_CBE 83.2935% -79 - C2 -1V59 12.8 DLDH_YEAST
79 PsiBlast_CBE 83.2135% -78 - C2 -1JEH 13.4 DLDH_YEAST
66 PsiBlast_CBE 83.2133% -77 - C2 -2QAE 10.6 DLDH_TRYCR
86 PsiBlast_CBE 83.1531% -79 - C2 -4JDR 13.1 DLDH_ECOLI
15 PsiBlast_PDB 83.1533% -78 - C2 -2QAE 10.7 DLDH_TRYCR
87 PsiBlast_CBE 82.6831% -79 - C2 -4JDR 13.0 DLDH_ECOLI
90 PsiBlast_CBE 79.3131% -72 - C2 -1BHY 11.6 ?
105 HHSearch 78.6230% -73 - C2 -1OJT 11.5 ?
89 PsiBlast_CBE 78.4431% -72 - C2 -1OJT 11.5 ?