@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1427: (2016-03-25 )
MIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL

Atome Classification :

(61 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMC_A_2(3BL6)
MTNN_STAAM
[Raw transfer]




FMC_A_2(3BL6)
MTNN_STAAM
[Raw transfer]




MTA_D_4(1Z5O)
MTNN_ECOLI
[Raw transfer]




MTM_D_4(1Y6R)
MTNN_ECOLI
[Raw transfer]




MTA_C_3(1Z5O)
MTNN_ECOLI
[Raw transfer]




MTA_B_4(4BMZ)
MQMTN_HELPY
[Raw transfer]




TDI_A_5(1Y6Q)
MTNN_ECOLI
[Raw transfer]




MTM_A_3(3EEI)
?
[Raw transfer]




FMC_C_3(1NC3)
MTNN_ECOLI
[Raw transfer]




MTH_D_4(1NC1)
MTNN_ECOLI
[Raw transfer]




FMC_D_4(1NC3)
MTNN_ECOLI
[Raw transfer]




MTM_A_3(3EEI)
?
[Raw transfer]




MTM_B_4(3EEI)
?
[Raw transfer]




TDI_B_8(4F2W)
?
[Raw transfer]




FMC_B_4(3NM5)
MQMTN_HELPJ
[Raw transfer]




TDI_A_3(4WKB)
?
[Raw transfer]




MTA_B_3(4G41)
?
[Raw transfer]




TDI_A_3(4F2W)
?
[Raw transfer]




MTH_C_3(1NC1)
MTNN_ECOLI
[Raw transfer]




TDI_B_6(1Y6Q)
MTNN_ECOLI
[Raw transfer]




FMC_A_3(3NM5)
MQMTN_HELPJ
[Raw transfer]




MTM_C_3(1Y6R)
MTNN_ECOLI
[Raw transfer]




BIG_B_5(4F3C)
?
[Raw transfer]




TDI_A_3(4X24)
?
[Raw transfer]




MTA_A_3(4BMZ)
MQMTN_HELPY
[Raw transfer]




2EL_B_7(4F2P)
?
[Raw transfer]




BIG_A_3(4F3C)
?
[Raw transfer]




TDI_B_4(4WKB)
?
[Raw transfer]




SAH_A_2(4OY3)
MQMTN_HELPJ
[Raw transfer]




BIG_A_2(4WKC)
?
[Raw transfer]




TDI_B_5(4X24)
?
[Raw transfer]




4CT_B_6(3O4V)
MTNN_ECOLI
[Raw transfer]




MTA_A_2(4P54)
MQMTN_HELPJ
[Raw transfer]




4CT_A_3(3O4V)
MTNN_ECOLI
[Raw transfer]




BIG_C_5(3DP9)
MTNN_VIBCH
[Raw transfer]




DF9_B_4(3DF9)
MTNN_ECO57
[Raw transfer]




DF9_A_3(3DF9)
MTNN_ECO57
[Raw transfer]




BIG_A_3(3DP9)
MTNN_VIBCH
[Raw transfer]




HCE_B_5(4F3K)
?
[Raw transfer]




HCE_A_3(4F3K)
?
[Raw transfer]




4F0_A_2(4YML)
?
[Raw transfer]




BIG_A_2(4FFS)
MQMTN_HELPJ
[Raw transfer]




SAH_A_4(4G89)
MTNN_KLEP7
[Raw transfer]




Q88_A_2(3MMS)
?
[Raw transfer]




GOL_A_4(1Z5P)
MTNN_ECOLI
[Raw transfer]




ADE_B_4(4BMX)
MQMTN_HELPY
[Raw transfer]




ADE_B_2(3NM6)
MQMTN_HELPJ
[Raw transfer]




ADE_B_4(4QEZ)
MTNN_BACAN
[Raw transfer]




SR1_C_3(1Z5N)
MTNN_ECOLI
[Raw transfer]




ADE_A_6(4QEZ)
MTNN_BACAN
[Raw transfer]




SR1_E_5(1Z5N)
MTNN_ECOLI
[Raw transfer]




ADE_D_4(1JYS)
MTNN_ECOLI
[Raw transfer]




2WP_A_2(4OJT)
MQMTN_HELPJ
[Raw transfer]




ADE_C_9(4QEZ)
MTNN_BACAN
[Raw transfer]




ADE_C_3(1JYS)
MTNN_ECOLI
[Raw transfer]




TRS_A_3(3NM4)
MQMTN_HELPJ
[Raw transfer]




EDO_B_6(3NM4)
MQMTN_HELPJ
[Raw transfer]




PGE_B_15(4F1W)
?
[Raw transfer]




PG4_A_5(4F1W)
?
[Raw transfer]




PE5_A_3(1Z5P)
MTNN_ECOLI
[Raw transfer]




2 PsiBlast_PDB 97.54100%-112 - C1 -4GMH - MTNN_STAAM -
81 HHSearch 97.03100%-107 - C1 -3BL6 6.2 MTNN_STAAM
1 PsiBlast_PDB 97.03100%-107 - C1 -3BL6 6.2 MTNN_STAAM
5 PsiBlast_PDB 82.4852% -97 - C1 -4G89 3.4 MTNN_KLEP7
14 PsiBlast_PDB 81.4554% -99 - C1 -4YML 6.5 ?
7 PsiBlast_PDB 81.3053%-102 - C1 -4F1W 2.1 ?
13 PsiBlast_PDB 81.1654% -98 - C1 -4WKC 6.9 ?
37 PsiBlast_CBE 81.0654%-103 - C1 -1JYS 3.8 MTNN_ECOLI
41 PsiBlast_CBE 80.9954% -99 - C1 -1Z5O 6.5 MTNN_ECOLI
39 PsiBlast_CBE 80.8054% -99 - C1 -1Z5N 3.7 MTNN_ECOLI
23 PsiBlast_CBE 80.5552%-100 - C1 -4G89 - MTNN_KLEP7 -
20 PsiBlast_PDB 80.4654%-107 - C1 -1Z5P 2.5 MTNN_ECOLI
11 PsiBlast_PDB 80.4253% -98 - C1 -4F3K 6.1 ?
26 PsiBlast_CBE 80.3353% -99 - C1 -4F3C 6.6 ?
16 PsiBlast_PDB 80.3154% -99 - C1 -1NC3 6.1 MTNN_ECOLI
19 PsiBlast_PDB 80.2454% -98 - C1 -1Y6R 6.4 MTNN_ECOLI
18 PsiBlast_PDB 80.2054% -96 - C1 -1Y6Q 6.4 MTNN_ECOLI
40 PsiBlast_CBE 80.1954%-100 - C1 -1Z5O 6.7 MTNN_ECOLI
17 PsiBlast_PDB 80.1654% -99 - C1 -1NC1 5.8 MTNN_ECOLI
10 PsiBlast_PDB 80.1353% -98 - C1 -4F3C 7.0 ?
33 PsiBlast_CBE 79.9954% -99 - C1 -1Y6R 6.3 MTNN_ECOLI
27 PsiBlast_CBE 79.8853% -98 - C1 -4F2W 6.4 ?
29 PsiBlast_CBE 79.8053% -98 - C1 -4F1W 2.0 ?
28 PsiBlast_CBE 79.7353% -98 - C1 -4F2P 6.6 ?
31 PsiBlast_CBE 79.6854% -99 - C1 -3DF9 6.9 MTNN_ECO57
34 PsiBlast_CBE 79.4654% -98 - C1 -1Y6Q 6.3 MTNN_ECOLI
36 PsiBlast_CBE 79.3654% -97 - C1 -1NC1 6.3 MTNN_ECOLI
32 PsiBlast_CBE 79.3354% -99 - C1 -3DF9 7.0 MTNN_ECO57
38 PsiBlast_CBE 79.2154% -99 - C1 -1Z5N 3.4 MTNN_ECOLI
35 PsiBlast_CBE 79.1854% -97 - C1 -1NC3 6.1 MTNN_ECOLI
15 PsiBlast_PDB 79.0454%-103 - C1 -1JYS 3.6 MTNN_ECOLI
22 PsiBlast_CBE 79.0053% -93 - C1 -3DP9 6.3 MTNN_VIBCH
25 PsiBlast_CBE 78.8253% -97 - C1 -4F3K 6.1 ?
9 PsiBlast_PDB 78.7953% -96 - C1 -4F2W 6.6 ?
30 PsiBlast_CBE 78.7254% -99 - C1 -3O4V 7.3 MTNN_ECOLI
82 HHSearch 78.5946% -95 * C1 *3EEI 6.1 ?
12 PsiBlast_PDB 78.5754% -98 - C1 -3O4V 7.4 MTNN_ECOLI
6 PsiBlast_PDB 78.4553% -93 - C1 -4WKB 6.3 ?
3 PsiBlast_PDB 77.8954% -91 - C1 -4X24 6.3 ?
24 PsiBlast_CBE 77.7753% -88 - C1 -4WKB 6.3 ?
21 PsiBlast_CBE 77.6254% -91 - C1 -4X24 6.1 ?
45 PsiBlast_CBE 77.5146% -95 - C1 -3EEI 6.2 ?
4 PsiBlast_PDB 77.3353% -91 - C1 -3DP9 6.5 MTNN_VIBCH
46 PsiBlast_CBE 76.9246% -93 - C1 -3EEI 6.1 ?
53 PsiBlast_CBE 74.6543% -94 - C1 -3MMS 4.2 ?
43 PsiBlast_CBE 74.2448% -89 - C1 -4QEZ 3.5 MTNN_BACAN
54 PsiBlast_CBE 73.7441% -95 - C1 -4G41 6.6 ?
44 PsiBlast_CBE 73.1948% -88 - C1 -4QEZ 4.6 MTNN_BACAN
42 PsiBlast_CBE 72.4448% -90 - C1 -4QEZ 3.6 MTNN_BACAN
58 PsiBlast_CBE 70.9036% -93 - C1 -4BMZ 6.5 MQMTN_HELPY
56 PsiBlast_CBE 70.7936% -92 - C1 -4BMX 4.1 MQMTN_HELPY
69 PsiBlast_CBE 70.7535% -95 - C1 -4OY3 7.2 MQMTN_HELPJ
59 PsiBlast_CBE 70.6536% -93 - C1 -4BMZ 6.6 MQMTN_HELPY
67 PsiBlast_CBE 70.5535% -94 - C1 -4FFS 7.0 MQMTN_HELPJ
62 PsiBlast_CBE 70.4235% -92 - C1 -3NM5 5.9 MQMTN_HELPJ
61 PsiBlast_CBE 70.2935% -93 - C1 -3NM6 4.0 MQMTN_HELPJ
68 PsiBlast_CBE 69.7035% -95 - C1 -4P54 6.8 MQMTN_HELPJ
63 PsiBlast_CBE 69.5435% -92 - C1 -3NM5 5.9 MQMTN_HELPJ
66 PsiBlast_CBE 69.4635% -93 - C1 -4OJT 3.6 MQMTN_HELPJ
65 PsiBlast_CBE 69.2535% -93 - C1 -3NM4 2.4 MQMTN_HELPJ
64 PsiBlast_CBE 68.1035%-100 - C1 -3NM4 3.5 MQMTN_HELPJ