@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1457: (2016-03-25 )
MIKIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKHLKLVINSVGDMASRKEYNEALVKHFEPVIHEFCSDCQSRLHTNPMRILDCKVDRDKEAIKTAPRITDFLNEESKAYYEQVKAYLDDLGIPYIEDPNLVRGLDYYTHTAFELMMDNPNYDGAITTLCGGGRYNGLLELLDGPSETGIGFALSIERLLLALEEEGIELDIEENLDLFIVTMGDQADRYAVKLLNHLRHNGIKADKDYLQRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFKK

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HIS_A_3(4E51)
SYH_BURTA
[Raw transfer]




HIS_B_4(4E51)
SYH_BURTA
[Raw transfer]




CHAIN_H_8(1HTT)
SYH_ECOLI
[Raw transfer]

-

CHAIN_F_4(1HTT)
SYH_ECOLI
[Raw transfer]

-

CHAIN_G_6(1HTT)
SYH_ECOLI
[Raw transfer]

-

CHAIN_E_2(1HTT)
SYH_ECOLI
[Raw transfer]

-

AMP_A_3(4RDX)
SYH_THET2
[Raw transfer]




CHAIN_E_2(1HTT)
SYH_ECOLI
[Raw transfer]

-

2 HHSearch 96.8699%-110 - C2 -1QE0 - SYH_STAAU -
22 PsiBlast_PDB 96.6999%-109 - C2 -1QE0 - SYH_STAAU -
60 PsiBlast_CBE 78.3540% -98 - C2 -4E51 3.0 SYH_BURTA
3 HHSearch 77.6842% -87 - C2 -1H4V - SYH_THET2 -
31 PsiBlast_PDB 77.6540% -90 - C2 -4E51 3.2 SYH_BURTA
45 PsiBlast_CBE 75.6643% -84 - C2 -1ADJ - SYH_THET8 -
23 PsiBlast_PDB 75.5543% -83 - C2 -1ADJ - SYH_THET8 -
47 PsiBlast_CBE 75.4443% -84 - C2 -1ADJ - SYH_THET8 -
46 PsiBlast_CBE 75.3843% -85 - C2 -1ADJ - SYH_THET8 -
43 PsiBlast_CBE 75.1843% -81 - C2 -1ADY - SYH_THET8 -
42 PsiBlast_CBE 74.9843% -79 - C2 -1ADY - SYH_THET8 -
24 PsiBlast_PDB 74.5043% -78 - C2 -1ADY - SYH_THET8 -
44 PsiBlast_CBE 74.2843% -78 - C2 -1ADY - SYH_THET8 -
25 PsiBlast_PDB 74.1843% -86 - C2 -1H4V - SYH_THET2 -
26 PsiBlast_PDB 73.8943% -83 - C2 -4RDX 6.4 SYH_THET2
55 PsiBlast_CBE 72.6038% -81 * C2 *1KMM - SYH_ECOLI -
50 PsiBlast_CBE 72.4438% -83 - C2 -2EL9 - SYH_ECOLI -
1 HHSearch 72.0939% -84 - C2 -1HTT 3.6 SYH_ECOLI
58 PsiBlast_CBE 71.8738% -86 - C2 -1HTT 3.6 SYH_ECOLI
48 PsiBlast_CBE 71.8338% -82 - C2 -2EL9 - SYH_ECOLI -
30 PsiBlast_PDB 71.8138% -83 - C2 -1HTT 3.6 SYH_ECOLI
59 PsiBlast_CBE 70.3438% -88 - C2 -1HTT 3.2 SYH_ECOLI
57 PsiBlast_CBE 70.0038% -84 - C2 -1HTT 3.2 SYH_ECOLI