@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1489: (2016-03-26 )
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTILKKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQGYLKIEQAYGSFSKFLWSYVNGKPKDLQYEHASDRITVDDTATQLSKDLKQYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADK_B_10(4AIA)
?
[Raw transfer]



ADK_C_12(4AIA)
?
[Raw transfer]



ADK_E_17(4AIA)
?
[Raw transfer]



ADK_A_7(4AIA)
?
[Raw transfer]



ADK_D_15(4AIA)
?
[Raw transfer]



ADK_C_13(4AI5)
?
[Raw transfer]



ADK_B_10(4AI5)
?
[Raw transfer]



ADK_A_7(4AI5)
?
[Raw transfer]



ADK_E_18(4AI5)
?
[Raw transfer]



ADK_D_16(4AI5)
?
[Raw transfer]



NACID_B_2(2OFI)
?
[Raw transfer]
-
PGE_B_12(2OFK)
?
[Raw transfer]



NACID_C_1(2OFI)
?
[Raw transfer]
-
4 PsiBlast_PDB 98.9599%-107 - C6 -4AI4 - ? -
2 PsiBlast_PDB 98.25100%-108 - C6 -4AIA 3.8 ?
16 PsiBlast_CBE 98.1699%-111 - C6 -4AI5 3.6 ?
10 PsiBlast_CBE 98.07100%-108 - C6 -4AIA 3.9 ?
9 PsiBlast_CBE 98.07100%-109 - C6 -4AIA 3.9 ?
18 HHSearch 98.06100%-105 - C6 -2JG6 - ? -
14 PsiBlast_CBE 98.0699%-108 - C6 -4AI5 3.5 ?
1 PsiBlast_PDB 98.06100%-105 - C6 -2JG6 - ? -
12 PsiBlast_CBE 97.74100%-110 - C6 -4AIA 3.8 ?
13 PsiBlast_CBE 97.6199%-110 - C6 -4AI5 3.8 ?
15 PsiBlast_CBE 97.4499%-108 - C6 -4AI5 3.7 ?
3 PsiBlast_PDB 97.3199%-108 - C6 -4AI5 3.8 ?
11 PsiBlast_CBE 97.04100%-109 - C6 -4AIA 3.6 ?
39 Fugue 79.8242% -80 - C6 -1LMZ - 3MG1_ECOLI -
5 PsiBlast_PDB 79.5543% -82 - C6 -1LMZ - 3MG1_ECOLI -
17 PsiBlast_CBE 79.0640% -92 - C6 -2OFK 2.9 ?
7 PsiBlast_PDB 78.9939% -93 - C6 -2OFI 4.7 ?
19 HHSearch 78.1840% -91 - C6 -2OFK - ? -
6 PsiBlast_PDB 78.1840% -91 - C6 -2OFK - ? -
20 HHSearch 50.0415% -49 - C6 -3FHG - OGG1_SULSO -