@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1512: (2016-03-26 )
MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELDTFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDELEDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLEIAPEPFTNEALTYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALFRAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKTGEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_B_1(1TDZ)
FPG_LACLC
[Raw transfer]

-

NACID_D_1(1NNJ)
FPG_LACLC
[Raw transfer]

-

BU3_A_6(4CIS)
?
[Raw transfer]




GOL_A_8(1PJI)
FPG_LACLC
[Raw transfer]




GOL_D_8(3SAR)
?
[Raw transfer]




NACID_C_3(3GPY)
?
[Raw transfer]

-

NACID_B_2(2XZU)
FPG_LACLC
[Raw transfer]

-

NACID_B_2(4PDI)
FPG_LACLC
[Raw transfer]

-

NACID_D_1(1PJI)
FPG_LACLC
[Raw transfer]

-

CHAIN_D_4(4CIS)
?
[Raw transfer]

-

NACID_B_2(2XZF)
FPG_LACLC
[Raw transfer]

-

NACID_B_2(3C58)
FPG_LACLC
[Raw transfer]

-

NACID_B_1(1XC8)
FPG_LACLC
[Raw transfer]

-

NACID_C_2(1L1Z)
?
[Raw transfer]

-

NACID_C_2(1L2D)
?
[Raw transfer]

-

NACID_C_3(3SAS)
?
[Raw transfer]

-

NACID_D_1(1PJJ)
FPG_LACLC
[Raw transfer]

-

NACID_B_2(4PDG)
FPG_LACLC
[Raw transfer]

-

NACID_B_2(4PD2)
FPG_LACLC
[Raw transfer]

-

NACID_D_3(1L2B)
?
[Raw transfer]

-

NACID_D_1(1PM5)
FPG_LACLC
[Raw transfer]

-

NACID_I_2(1K82)
FPG_ECOLI
[Raw transfer]

-

NACID_I_2(1K82)
FPG_ECOLI
[Raw transfer]

-

CHAIN_D_4(4CIS)
?
[Raw transfer]

-

NACID_B_2(4PCZ)
FPG_LACLC
[Raw transfer]

-

NACID_J_4(1K82)
FPG_ECOLI
[Raw transfer]

-

NACID_L_8(1K82)
FPG_ECOLI
[Raw transfer]

-

NACID_D_3(3SAR)
?
[Raw transfer]

-

NACID_K_6(1K82)
FPG_ECOLI
[Raw transfer]

-

NACID_C_3(3SBJ)
?
[Raw transfer]

-

13 PsiBlast_PDB 87.3132% -80 - C13 -2F5S - ? -
19 PsiBlast_PDB 87.0632% -80 - C13 -3GPY 7.0 ?
12 PsiBlast_PDB 86.4932% -80 - C13 -2F5Q - ? -
7 PsiBlast_PDB 86.3532% -81 - C13 -1R2Y - ? -
20 PsiBlast_PDB 86.2532% -80 - C13 -3GQ4 - ? -
8 PsiBlast_PDB 85.6032% -85 - C13 -1R2Z - ? -
28 PsiBlast_CBE 85.4431% -81 - C13 -3JR5 - ? -
5 PsiBlast_PDB 84.7232% -87 - C13 -1L2D 7.0 ?
4 PsiBlast_PDB 84.5332% -89 - C13 -1L2C - ? -
1 PsiBlast_PDB 84.2232% -89 - C13 -1L1T - ? -
29 PsiBlast_CBE 83.9931% -86 - C13 -3JR4 - ? -
10 PsiBlast_PDB 83.8632% -93 - C13 -2F5O - ? -
40 PsiBlast_CBE 83.7931% -93 - C13 -4G4O - ? -
3 PsiBlast_PDB 83.7032% -86 - C13 -1L2B 4.0 ?
2 PsiBlast_PDB 83.5632% -86 - C13 -1L1Z 4.6 ?
15 PsiBlast_PDB 83.4632% -94 - C13 -3GQ5 - ? -
42 PsiBlast_CBE 83.4134% -92 - C13 -1K82 5.6 FPG_ECOLI
43 PsiBlast_CBE 83.3934% -94 - C13 -1K82 4.6 FPG_ECOLI
32 PsiBlast_CBE 83.3732% -94 - C13 -3U6P - ? -
37 PsiBlast_CBE 83.2432% -94 - C13 -3U6D - ? -
22 PsiBlast_CBE 83.0432% -95 - C13 -3SBJ 2.7 ?
45 PsiBlast_CBE 82.8234% -93 - C13 -1K82 5.6 FPG_ECOLI
44 PsiBlast_CBE 82.6534% -94 - C13 -1K82 5.4 FPG_ECOLI
52 PsiBlast_CBE 82.1835% -58 - C13 -1XC8 6.3 FPG_LACLC
54 PsiBlast_CBE 81.8835% -56 - C13 -1PJI 3.1 FPG_LACLC
16 PsiBlast_PDB 81.6032% -94 - C13 -3SAR 4.8 ?
57 PsiBlast_CBE 81.5935% -63 - C13 -4CIS 3.9 ?
48 PsiBlast_CBE 81.5735% -59 - C13 -4PDG 3.5 FPG_LACLC
59 PsiBlast_CBE 81.5335% -58 - C13 -1NNJ 4.2 FPG_LACLC
27 PsiBlast_CBE 81.4832% -90 - C13 -3SAS 3.6 ?
50 PsiBlast_CBE 81.3135% -54 - C13 -2XZU 3.3 FPG_LACLC
49 PsiBlast_CBE 81.2735% -57 - C13 -3C58 6.5 FPG_LACLC
55 PsiBlast_CBE 81.2235% -55 - C13 -4PCZ 3.7 FPG_LACLC
53 PsiBlast_CBE 81.0935% -55 - C13 -1PM5 3.8 FPG_LACLC
58 PsiBlast_CBE 80.9535% -59 - C13 -1PJJ 3.5 FPG_LACLC
56 PsiBlast_CBE 80.8935% -58 - C13 -4CIS 4.2 ?
47 PsiBlast_CBE 80.8235% -63 - C13 -4PDI 6.4 FPG_LACLC
46 PsiBlast_CBE 80.7935% -59 - C13 -1TDZ 5.5 FPG_LACLC
51 PsiBlast_CBE 80.5535% -56 - C13 -2XZF 5.4 FPG_LACLC
68 HHSearch 80.3335% -85 - C13 -1K82 5.6 FPG_ECOLI
64 PsiBlast_CBE 79.5535% -58 - C13 -4PD2 3.4 FPG_LACLC