@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1533: (2016-03-26 )
MSKLILAINAGSSSLKFQLIRMPEEELVTKGLIERIGLKDSIFTIEVNGEKVKTVQDIKDHVEAVDIMLDAFKAHNIINDINDIDGTGHRVVHGGEKFPESVAITDEVEKEIEELSELAPLHNPANLMGIRAFRKLLPNIPHVAIFDTAFHQTMPEKAYLYSLPYHYYKDYGIRKYGFHGTSHKFVSQRAAEMLDKPIEDLRIISCHIGNGASIAAIDGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPFIMEKTGKTAEQVLEILNKESGLLGLSGTSSDLRDLSEEAESGKARSQMALDVFASKIHKYIGSYAARMHGVDVIVFTAGIGENSVEIRAKVLEGLEFMGVYWDPKKNENLLRGKEGFINYPHSPVKVVVIPTDEESMIARDVMTFGGLK

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AQP_A_4(4FWN)
TDCD_SALTY
[Raw transfer]




ATP_A_6(4FWM)
TDCD_SALTY
[Raw transfer]




ANP_E_5(1X3N)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E1Z)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E20)
TDCD_SALTY
[Raw transfer]




GTP_A_4(4FWQ)
TDCD_SALTY
[Raw transfer]




CTP_A_6(4FWS)
TDCD_SALTY
[Raw transfer]




ADP_F_6(1G99)
ACKA_METTE
[Raw transfer]




GDP_A_4(4FWP)
TDCD_SALTY
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




ADP_C_3(1X3M)
TDCD_SALTY
[Raw transfer]




AMP_B_8(4IJN)
ACKA_MYCS2
[Raw transfer]




ADP_E_5(1TUU)
ACKA_METTE
[Raw transfer]




AMP_F_6(1TUU)
ACKA_METTE
[Raw transfer]




AMP_A_4(4IJN)
ACKA_MYCS2
[Raw transfer]




APC_A_3(4IZ9)
ACKA_MYCA1
[Raw transfer]




5GP_A_5(4FWO)
TDCD_SALTY
[Raw transfer]




ADP_A_4(1TUY)
ACKA_METTE
[Raw transfer]




AMP_A_3(4FWK)
TDCD_SALTY
[Raw transfer]




ADP_B_5(1TUY)
ACKA_METTE
[Raw transfer]




C5P_A_4(4FWR)
TDCD_SALTY
[Raw transfer]




PGE_B_6(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




EDO_A_2(4FWL)
TDCD_SALTY
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




EDO_A_2(4FWQ)
TDCD_SALTY
[Raw transfer]




ACY_B_7(1TUY)
ACKA_METTE
[Raw transfer]




46 HHSearch 98.1756%-103 * C4 *2IIR - ACKA_THEMA -
1 PsiBlast_PDB 97.3957%-102 - C4 -2IIR - ACKA_THEMA -
21 PsiBlast_CBE 96.5052%-103 - C4 -1G99 6.5 ACKA_METTE
23 PsiBlast_CBE 95.5752%-102 - C4 -1TUU 4.9 ACKA_METTE
33 Fugue 94.8951% -97 - C4 -1G99 6.1 ACKA_METTE
2 PsiBlast_PDB 94.7352% -97 - C4 -1G99 6.1 ACKA_METTE
22 PsiBlast_CBE 94.6952%-100 - C4 -1TUY 4.6 ACKA_METTE
43 HHSearch 94.5351% -97 - C4 -1G99 6.2 ACKA_METTE
4 PsiBlast_PDB 94.3152%-102 - C4 -1TUY 5.4 ACKA_METTE
3 PsiBlast_PDB 93.8352% -96 - C4 -1TUU 5.8 ACKA_METTE
10 PsiBlast_PDB 89.9143% -92 - C4 -2E1Z 9.6 TDCD_SALTY
18 PsiBlast_PDB 89.8343% -92 - C4 -4FWS 5.8 TDCD_SALTY
15 PsiBlast_PDB 89.7843% -92 - C4 -4FWP 6.1 TDCD_SALTY
11 PsiBlast_PDB 89.7543% -92 - C4 -2E20 9.7 TDCD_SALTY
14 PsiBlast_PDB 89.7443% -95 - C4 -4FWO 5.7 TDCD_SALTY
8 PsiBlast_PDB 89.7243% -91 - C4 -1X3N 5.9 TDCD_SALTY
12 PsiBlast_PDB 89.6343% -92 - C4 -4FWK 5.4 TDCD_SALTY
16 PsiBlast_PDB 89.2843% -91 - C4 -4FWQ 6.2 TDCD_SALTY
7 PsiBlast_PDB 89.1943% -90 - C4 -1X3M 5.5 TDCD_SALTY
17 PsiBlast_PDB 89.0443% -90 - C4 -4FWR 3.9 TDCD_SALTY
19 PsiBlast_PDB 88.7843% -89 - C4 -4FWL 2.1 TDCD_SALTY
20 PsiBlast_PDB 88.2143% -91 - C4 -4FWM 6.2 TDCD_SALTY
13 PsiBlast_PDB 88.0943% -91 - C4 -4FWN 7.4 TDCD_SALTY
29 PsiBlast_CBE 85.4842% -93 - C4 -3R9P 2.6 ACKA_MYCPA
30 PsiBlast_CBE 85.3042% -92 - C4 -3R9P 2.0 ACKA_MYCPA
47 HHSearch 85.0643% -90 - C4 -3R9P 2.0 ACKA_MYCPA
27 PsiBlast_CBE 84.5942% -91 - C4 -4IZ9 5.7 ACKA_MYCA1
32 PsiBlast_CBE 84.1542% -90 - C4 -4IJN 6.6 ACKA_MYCS2
31 PsiBlast_CBE 83.8142% -87 - C4 -4IJN 6.4 ACKA_MYCS2