@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1552: (2016-03-26 )
MNKHHPKLRSFYSIRKSTLGVASVIVSTLFLITSQHQAQAAENTNTSDKISENQNNNATTTQQPKDTNQTQPATQPVITAKNYPAADESLKDAIKDPALENKEHDIGPREQVNFQLLDKNNETQYYHFFSIKDPADVYYTKKKAEVELDINTASTWKKFEVYENNQKLPVRLVSYSPVPEDHAYIRFPVSDGTQELKIVSSTQIDDGEETNYDYTKLVFAKPIYNDPSLVKSDTNDAVVTNDQSSSDASNQTNTNTSNQNTSTTNNANNQPQATTNMSQPAQPKSSANADQASSQPAHETNSNGNTNDKTNESSNQSDVNQQYPPADESLQDAIKNPAIIDKEHTADNWRPIDFQMKNDKGERQFYHYASTVEPATVIFTKTGPVIELGLKTASTWKKFEVYEGDKKLPVELVSYDSDKDYAYIRFPVSNGTRDVKNVSSIEYGENIHEDYDYTLMVFAQPITNNPDDYVDEETYNLQKLLAPYHKAKTLERQVYELEKLQEKLPEKYKAEYKKKLDQTRVELADQVKSAVTEFENVTPTNDQLTDLQEAHFVVFESEENSESVMDGFVEHPFYTATLNGQKYVVMKTKDDSYWKDLIVEGKRVTTVSKDPKNNSRTLIFPYIPDKAVYNAIVKVVVANIGYEGQYHVRIINQDINTKDDDTSQNNTSEPLNVQTGQEGKVADTDVAENSSTATNPKDASDKADVIEPESDVVKDADNNIDKDVQHDVDHLSDMSDNNHFDKYDLKEMDTQIAKDTDRNVDNSVGMSSNVDTDKDSNKNKDKVIQLAHIADKNNHTGKAAKLDVVKQNYNNTDKVTDKKTTEHLPSDIHKTVDKTVKTKEKAGTPSKENKLSQSKMLPKTGETTSSQSWWGLYALLGMLALFIPKFRKESK

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3ZZ_B_5(3VTM)

[Raw transfer]




HEM_A_2(2Z6F)

[Raw transfer]




MNR_B_5(3QUH)

[Raw transfer]




GIX_B_6(3QUG)

[Raw transfer]




HEM_D_12(3RTL)

[Raw transfer]




HEM_B_7(3RTL)
ISDB_STAAN
[Raw transfer]




GOL_E_18(3VUA)
ISDH_STAAM
[Raw transfer]




GOL_C_11(3VUA)

[Raw transfer]




GOL_C_11(3VUA)
ISDH_STAAM
[Raw transfer]




GOL_E_18(3VUA)
ISDH_STAAM
[Raw transfer]




GIX_B_6(3QUG)
ISDH_STAAM
[Raw transfer]




3ZZ_B_5(3VTM)
ISDH_STAAM
[Raw transfer]




MNR_B_5(3QUH)
ISDH_STAAM
[Raw transfer]




HEM_A_4(4XS0)
ISDH_STAA3
[Raw transfer]




HEM_D_12(3RTL)
ISDB_STAAN
[Raw transfer]




GIX_B_6(3QUG)
ISDH_STAAM
[Raw transfer]




HEM_D_12(3RUR)
ISDB_STAAN
[Raw transfer]




HEM_B_7(3RTL)
ISDB_STAAN
[Raw transfer]




HEM_B_7(3RTL)
ISDB_STAAN
[Raw transfer]




2 PsiBlast_PDB 89.3498% -82 - C4 -4XS0 2.8 ISDH_STAA3
21 PsiBlast_CBE 88.4198% -95 - C4 -4IJ2 - ISDH_STAA3 -
1 PsiBlast_PDB 88.2298% -97 - C4 -4IJ2 - ISDH_STAA3 -
12 PsiBlast_PDB 63.09100%-103 - C4 -3VUA 2.9 ISDH_STAAM
59 Fugue 62.89100%-100 * C4 *2E7D - ISDH_STAAM -
8 PsiBlast_PDB 62.7398%-100 - C4 -2E7D - ISDH_STAAM -
27 PsiBlast_CBE 62.25100% -94 - C4 -3VUA 2.9 ISDH_STAAM
6 PsiBlast_PDB 61.73100% -48 - C4 -3S48 - HBA_HUMAN (first) -
9 PsiBlast_PDB 61.7198%-101 - C4 -2Z6F 11.9
26 PsiBlast_CBE 61.65100% -98 - C4 -3VUA - ISDH_STAAM -
29 PsiBlast_CBE 61.57100%-105 - C4 -3QUG 11.3
10 PsiBlast_PDB 61.53100%-102 - C4 -3QUG 3.3 ISDH_STAAM
24 PsiBlast_CBE 61.51100% -99 - C4 -3VUA 1.9 ISDH_STAAM
5 PsiBlast_PDB 61.32100% -51 - C4 -3OVU - ISDH_STAAS -
28 PsiBlast_CBE 61.06100% -98 - C4 -3QUH 11.5
3 PsiBlast_PDB 60.9997% -54 - C4 -4FC3 - HBA_HUMAN -
4 PsiBlast_PDB 60.60100% -50 - C4 -3SZK - ISDH_STAAW -
22 PsiBlast_CBE 60.5998%-101 - C4 -2E7D - -
25 PsiBlast_CBE 60.45100% -98 - C4 -3VUA - ISDH_STAAM -
54 Fugue 60.29100% -42 - C4 -2H3K - ISDH_STAAS -
13 PsiBlast_PDB 60.23100%-101 - C4 -3VTM 3.3 ISDH_STAAM
23 PsiBlast_CBE 60.08100% -97 - C4 -3VUA 3.0
11 PsiBlast_PDB 59.99100% -96 - C4 -3QUH 3.3 ISDH_STAAM
36 HHSearch 59.4095% -96 - C4 -3QUG 3.3 ISDH_STAAM
30 PsiBlast_CBE 59.30100% -94 - C4 -3VTM 11.4
33 PsiBlast_CBE 56.6059% -88 - C4 -3RTL 11.4 ISDB_STAAN
32 PsiBlast_CBE 56.1059% -82 - C4 -3RTL 4.1 ISDB_STAAN
15 PsiBlast_PDB 55.7259% -94 - C4 -3RTL 4.2 ISDB_STAAN
31 PsiBlast_CBE 54.6659% -86 - C4 -3RTL 11.7
16 PsiBlast_PDB 53.7158% -84 - C4 -3RUR 4.2 ISDB_STAAN
38 HHSearch 53.2759% -87 - C4 -3RTL 4.2 ISDB_STAAN