@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1571: (2016-03-27 )
MEKIFLNGEFVSPSEAKVSYNDRGYVFGDGIYEYIRVYNGKLFTVTEHYERFLRSANEIGLDLNYSVEELIELSRKLVDMNQIETGAIYIQATRGVAERNHSFPTPEVEPAIVAYTKSYDRPYDHLENGVNGVTVEDIRWLRCDIKSLNLLGNVLAKEYAVKYNAVEAIQHRGETVTEGSSSNAYAIKDGVIYTHPINNYILNGITRIVIKKIAEDYNIPFKEETFTVDFLKNADEVIVSSTSAEVTPVIKLDGEPINDGKVGPITRQLQEGFEKYIESHSI

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PSZ_A_3(3LQS)
DAAA_BACYM
[Raw transfer]



DCS_A_3(2DAA)
DAAA_BACYM
[Raw transfer]



PSZ_B_4(3LQS)
DAAA_BACYM
[Raw transfer]



DCS_B_4(2DAA)
DAAA_BACYM
[Raw transfer]



PMP_B_4(1A0G)
DAAA_BACYM
[Raw transfer]



PMP_A_3(1A0G)
DAAA_BACYM
[Raw transfer]



PLP_A_3(1DAA)
DAAA_BACYM
[Raw transfer]



PLP_B_4(1DAA)
DAAA_BACYM
[Raw transfer]



PDD_B_4(3DAA)
DAAA_BACYM
[Raw transfer]



PLP_A_5(4DAA)
DAAA_BACYM
[Raw transfer]



PDD_A_3(3DAA)
DAAA_BACYM
[Raw transfer]



PLP_A_3(2DAB)
DAAA_BACYM
[Raw transfer]



PLP_B_6(4DAA)
DAAA_BACYM
[Raw transfer]



PDD_A_3(3DAA)
DAAA_BACYM
[Raw transfer]



PLP_A_5(1G2W)
DAAA_BACYM
[Raw transfer]



PLP_B_6(1G2W)
DAAA_BACYM
[Raw transfer]



PLP_B_4(2DAB)
DAAA_BACYM
[Raw transfer]



PLP_B_4(5DAA)
DAAA_BACYM
[Raw transfer]



PLP_A_3(5DAA)
DAAA_BACYM
[Raw transfer]



PLP_A_3(5DAA)
DAAA_BACYM
[Raw transfer]



2ML_H_8(1I1L)
ILVE_ECOLI
[Raw transfer]



GBN_C_9(2EJ3)
?
[Raw transfer]



GBN_B_7(2EJ3)
?
[Raw transfer]



GBN_A_5(2EJ3)
?
[Raw transfer]



4MV_B_7(2EIY)
?
[Raw transfer]



ACY_B_5(3LQS)
DAAA_BACYM
[Raw transfer]



4MV_C_9(2EIY)
?
[Raw transfer]



4MV_I_9(1I1M)
ILVE_ECOLI
[Raw transfer]



4MV_A_5(2EIY)
?
[Raw transfer]



4MV_A_5(2EIY)
?
[Raw transfer]
25 PsiBlast_CBE 93.6452% -86 - C6 -3DAA 6.2 DAAA_BACYM
2 PsiBlast_PDB 93.5052% -87 - C6 -2DAA 6.9 DAAA_BACYM
23 PsiBlast_CBE 93.3652% -85 - C6 -3LQS 6.3 DAAA_BACYM
22 PsiBlast_CBE 93.0852% -87 - C6 -1DAA 5.3 DAAA_BACYM
3 PsiBlast_PDB 92.7852% -86 - C6 -3LQS 6.4 DAAA_BACYM
28 PsiBlast_CBE 92.7251% -86 - C6 -2DAB 4.7 DAAA_BACYM
8 PsiBlast_PDB 92.5951% -85 - C6 -1A0G 5.9 DAAA_BACYM
29 PsiBlast_CBE 92.4851% -85 - C6 -1A0G 5.0 DAAA_BACYM
5 PsiBlast_PDB 92.4852% -85 - C6 -4DAA 4.0 DAAA_BACYM
24 PsiBlast_CBE 92.3652% -83 - C6 -4DAA 4.1 DAAA_BACYM
1 PsiBlast_PDB 92.2452% -84 - C6 -1DAA 6.1 DAAA_BACYM
7 PsiBlast_PDB 92.0151% -87 - C6 -1G2W 3.9 DAAA_BACYM
21 PsiBlast_CBE 91.8952% -86 - C6 -2DAA 6.9 DAAA_BACYM
6 PsiBlast_PDB 91.8551% -86 - C6 -5DAA 4.0 DAAA_BACYM
9 PsiBlast_PDB 91.7451% -85 - C6 -2DAB 5.3 DAAA_BACYM
27 PsiBlast_CBE 91.7151% -86 - C6 -1G2W 4.4 DAAA_BACYM
4 PsiBlast_PDB 91.0352% -83 - C6 -3DAA 6.5 DAAA_BACYM
68 Fugue 90.9350% -84 - C6 -5DAA 4.0 DAAA_BACYM
26 PsiBlast_CBE 90.8551% -85 - C6 -5DAA 4.1 DAAA_BACYM
53 HHSearch 90.7752% -82 * C6 *3DAA 6.5 DAAA_BACYM
55 HHSearch 74.9530% -83 - C6 -2EIY 1.3 ?
48 PsiBlast_CBE 72.4331% -84 - C6 -2EIY 1.3 ?
33 PsiBlast_CBE 71.6031% -84 - C6 -2EJ3 2.5 ?
32 PsiBlast_CBE 70.1131% -83 - C6 -2EJ3 2.1 ?
49 PsiBlast_CBE 69.9331% -87 - C6 -2EIY 1.8 ?
34 PsiBlast_CBE 69.5131% -88 - C6 -2EJ3 2.1 ?
47 PsiBlast_CBE 68.6831% -84 - C6 -2EIY 1.4 ?