@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1587: (2016-03-27 )
MQFDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQNFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHGGMIIYLPQEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERIEVIVPETVHNHDYMVTKKIKMGHLI

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5RP_A_3(4P77)
RIBB_VIBCH
[Raw transfer]




RES_A_3(4P6P)
RIBB_VIBCH
[Raw transfer]




5SP_A_3(3LQU)
RIBB_SALTY
[Raw transfer]




5RP_B_5(4P77)
RIBB_VIBCH
[Raw transfer]




RES_B_7(4P6P)
RIBB_VIBCH
[Raw transfer]




5RP_D_4(1TKU)
RIB3_CANAL
[Raw transfer]




5RP_B_4(1SNN)
RIBB_METJA
[Raw transfer]




RES_B_4(4P6C)
RIBB_VIBCH
[Raw transfer]




5RP_A_3(1SNN)
RIBB_METJA
[Raw transfer]




5RP_C_3(1TKU)
RIB3_CANAL
[Raw transfer]




RES_A_3(4P6C)
RIBB_VIBCH
[Raw transfer]




5RP_A_3(4P8E)
RIBB_VIBCH
[Raw transfer]




5RP_A_3(1SNN)
RIBB_METJA
[Raw transfer]




5RP_B_4(1PVY)
RIBB_METJA
[Raw transfer]




5RP_A_3(1PVY)
RIBB_METJA
[Raw transfer]




5RP_B_8(4P8E)
RIBB_VIBCH
[Raw transfer]




5RP_A_2(2RIU)
RIB3_CANAL
[Raw transfer]




GOL_A_5(1K4O)
RIB3_MAGO7
[Raw transfer]




GOL_A_8(4FFJ)
?
[Raw transfer]




GOL_B_10(3MIO)
RIBBA_MYCTA
[Raw transfer]




GOL_A_5(3MIO)
RIBBA_MYCTA
[Raw transfer]




GOL_A_5(3MIO)
RIBBA_MYCTA
[Raw transfer]




GOL_B_12(3MIO)
RIBBA_MYCTA
[Raw transfer]




EDO_A_3(4P6D)
RIBB_VIBCH
[Raw transfer]




1 PsiBlast_PDB 98.5145%-102 - C7 -4I14 - RIBBA_MYCTA -
20 PsiBlast_PDB 79.8243% -75 - C7 -1K4O 3.8 RIB3_MAGO7
19 PsiBlast_PDB 79.1243% -72 - C7 -1K4L - RIB3_MAGO7 -
51 Fugue 79.0344% -74 - C7 -1K4I - RIB3_MAGO7 -
30 PsiBlast_CBE 78.9943% -73 - C7 -1K4P - RIB3_MAGO7 -
18 PsiBlast_PDB 78.9943% -73 - C7 -1K4I - RIB3_MAGO7 -
2 PsiBlast_PDB 77.9751% -80 - C7 -4FFJ 3.0 ?
65 HHSearch 77.8844% -73 - C7 -1K4I - RIB3_MAGO7 -
17 PsiBlast_PDB 77.8843% -75 - C7 -1K49 - RIB3_MAGO7 -
24 PsiBlast_CBE 76.5043% -72 - C7 -3LS6 - RIBB_SALTY -
23 PsiBlast_CBE 76.4346% -76 - C7 -3MIO 3.1 RIBBA_MYCTA
8 PsiBlast_PDB 76.0546% -76 - C7 -3MIO 2.9 RIBBA_MYCTA
63 HHSearch 75.5845% -73 - C7 -1TKS - RIB3_CANAL -
13 PsiBlast_PDB 75.3545% -75 - C7 -1TKS - RIB3_CANAL -
66 HHSearch 75.0147% -74 - C7 -3MIO 2.9 RIBBA_MYCTA
29 PsiBlast_CBE 74.9145% -74 - C7 -1TKU 3.1 RIB3_CANAL
25 PsiBlast_CBE 74.8943% -76 - C7 -3LRJ - RIBB_SALTY -
15 PsiBlast_PDB 74.8545% -77 - C7 -2RIS - RIB3_CANAL -
11 PsiBlast_PDB 74.8543% -69 - C7 -3LS6 - RIBB_SALTY -
7 PsiBlast_PDB 74.8446% -74 - C7 -3MGZ - RIBBA_MYCTA -
16 PsiBlast_PDB 74.3845% -76 - C7 -2RIU 3.6 RIB3_CANAL
33 PsiBlast_CBE 74.3542% -73 - C7 -4P8E 4.0 RIBB_VIBCH
37 PsiBlast_CBE 74.2942% -75 - C7 -4P6P 4.5 RIBB_VIBCH
14 PsiBlast_PDB 74.2845% -73 - C7 -1TKU 3.1 RIB3_CANAL
32 PsiBlast_CBE 74.2242% -74 - C7 -4P8E 4.0 RIBB_VIBCH
9 PsiBlast_PDB 74.2243% -70 - C7 -3LQU 3.6 RIBB_SALTY
34 PsiBlast_CBE 73.8742% -76 - C7 -4P77 5.1 RIBB_VIBCH
36 PsiBlast_CBE 73.7942% -72 - C7 -4P6P 4.5 RIBB_VIBCH
41 PsiBlast_CBE 73.4942% -72 - C7 -4P6C 4.7 RIBB_VIBCH
39 PsiBlast_CBE 73.2442% -76 - C7 -4P6D 2.7 RIBB_VIBCH
40 PsiBlast_CBE 73.1742% -72 - C7 -4P6C 5.0 RIBB_VIBCH
64 HHSearch 73.0436% -65 - C7 -1SNN 4.3 RIBB_METJA
48 PsiBlast_CBE 72.5333% -73 - C7 -1SNN 4.2 RIBB_METJA
50 PsiBlast_CBE 72.1633% -76 - C7 -1PVY 4.4 RIBB_METJA
47 PsiBlast_CBE 71.9133% -72 - C7 -1SNN 4.2 RIBB_METJA
35 PsiBlast_CBE 71.7642% -74 - C7 -4P77 4.8 RIBB_VIBCH
49 PsiBlast_CBE 71.1433% -73 - C7 -1PVY 3.7 RIBB_METJA