@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1606: (2016-03-27 )
MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGTNEAVMVDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQVSIKPVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPLMNAQILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG

Atome Classification :

(68 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_6(3CV7)
AK1A1_PIG
[Raw transfer]



NDP_B_4(4G5D)
PGFS_LEIMA
[Raw transfer]



NDP_A_2(1US0)
ALDR_HUMAN
[Raw transfer]



NAP_A_3(3UZW)
AK1D1_HUMAN
[Raw transfer]



NAP_B_6(3UZY)
AK1D1_HUMAN
[Raw transfer]



NAP_A_5(3FX4)
AK1A1_PIG
[Raw transfer]



NDP_B_6(3WBW)
?
[Raw transfer]



NAP_A_3(4GIE)
PGFS_TRYCC
[Raw transfer]



NDP_A_4(3WBW)
?
[Raw transfer]



NAP_B_6(3UZZ)
AK1D1_HUMAN
[Raw transfer]



NAP_B_2(1A80)
DKGA_CORSC
[Raw transfer]



NAP_B_4(1VP5)
?
[Raw transfer]



NAP_A_3(1VP5)
?
[Raw transfer]



NAP_X_2(1ZUA)
AK1BA_HUMAN
[Raw transfer]



NAP_A_3(3UZX)
AK1D1_HUMAN
[Raw transfer]



NAP_A_2(4GAB)
AK1BA_HUMAN
[Raw transfer]



NDP_A_3(4G5D)
PGFS_LEIMA
[Raw transfer]



NAP_A_3(3UZY)
AK1D1_HUMAN
[Raw transfer]



NAP_A_2(3H7U)
AKRC9_ARATH
[Raw transfer]



NAP_B_5(3UZW)
AK1D1_HUMAN
[Raw transfer]



NDP_A_4(3WBW)
?
[Raw transfer]



NAP_A_3(3H4G)
AK1A1_PIG
[Raw transfer]



NAP_A_2(4GA8)
AK1BA_HUMAN
[Raw transfer]



NAP_A_2(3H7U)
AKRC9_ARATH
[Raw transfer]



NAP_A_3(1VP5)
?
[Raw transfer]



NAP_B_2(1FRB)
ALD2_MOUSE
[Raw transfer]



NAD_C_3(1M9H)
DKGA_CORSC
[Raw transfer]



NDP_B_4(3D3F)
GR_BACSU
[Raw transfer]



NAP_B_6(3UZX)
AK1D1_HUMAN
[Raw transfer]



NAP_A_3(3UZZ)
AK1D1_HUMAN
[Raw transfer]



NAP_C_3(1VBJ)
PGFS_TRYBB
[Raw transfer]



NAP_A_2(4GQG)
AK1BA_HUMAN
[Raw transfer]



NAP_A_3(4GQ0)
AK1BA_HUMAN
[Raw transfer]



NAP_C_3(1VBJ)
PGFS_TRYBB
[Raw transfer]



NAP_B_2(1HQT)
AK1A1_PIG
[Raw transfer]



NAP_D_4(1VBJ)
PGFS_TRYBB
[Raw transfer]



NAP_B_10(4JQ4)
AK1C2_HUMAN
[Raw transfer]



NAP_B_2(1C9W)
ALD2_CRIGR
[Raw transfer]



NAP_A_3(4JIH)
AK1BA_HUMAN
[Raw transfer]



NAP_A_3(3KRB)
?
[Raw transfer]



NAP_A_3(4I5X)
AK1BA_HUMAN
[Raw transfer]



NAP_X_2(4JII)
AK1BA_HUMAN
[Raw transfer]



NDP_B_4(3WBY)
?
[Raw transfer]



NDP_A_3(3WBY)
?
[Raw transfer]



GOL_A_6(3O0K)
?
[Raw transfer]



GOL_A_6(3O0K)
?
[Raw transfer]



EDO_B_20(4F40)
PGFS_LEIMA
[Raw transfer]



EDO_A_10(4F40)
PGFS_LEIMA
[Raw transfer]



GOL_B_8(3O0K)
?
[Raw transfer]



GLU_A_3(4FZI)
PGFS_TRYCC
[Raw transfer]



GOL_C_10(3O0K)
?
[Raw transfer]



GOL_H_8(1MZR)
DKGA_ECOLI
[Raw transfer]



GOL_H_8(1MZR)
DKGA_ECOLI
[Raw transfer]



GOL_D_12(3O0K)
?
[Raw transfer]



NAP_B_2(1EKO)
ALDR_PIG
[Raw transfer]



GLU_B_4(4FZI)
PGFS_TRYCC
[Raw transfer]



CIT_E_5(1VBJ)
PGFS_TRYBB
[Raw transfer]



CIT_F_6(1VBJ)
PGFS_TRYBB
[Raw transfer]



EDO_A_12(4F40)
PGFS_LEIMA
[Raw transfer]



FLC_A_4(4GAC)
AK1A1_MOUSE
[Raw transfer]



FLC_B_6(4GAC)
AK1A1_MOUSE
[Raw transfer]
3 PsiBlast_PDB 96.4254% -79 - C7 -3B3D - YTBE_BACSU -
23 PsiBlast_CBE 95.6954% -78 - C7 -3B3D - YTBE_BACSU -
24 PsiBlast_CBE 95.6854% -82 - C7 -3B3D - YTBE_BACSU -
115 HHSearch 95.3754% -77 - C7 -3B3D - YTBE_BACSU -
2 PsiBlast_PDB 93.0756% -80 - C7 -3F7J - GR_BACSU -
22 PsiBlast_CBE 92.8156% -79 - C7 -3F7J - GR_BACSU -
122 HHSearch 92.5056% -79 - C7 -3F7J - GR_BACSU -
21 PsiBlast_CBE 92.4856% -79 - C7 -3D3F 10.8 GR_BACSU
4 PsiBlast_PDB 92.3847% -78 - C7 -4FZI 2.6 PGFS_TRYCC
5 PsiBlast_PDB 91.8947% -78 - C7 -4GIE 12.9 PGFS_TRYCC
1 PsiBlast_PDB 91.5156% -78 - C7 -3D3F - GR_BACSU -
25 PsiBlast_CBE 91.3047% -79 - C7 -4FZI 2.4 PGFS_TRYCC
28 PsiBlast_CBE 90.1245% -85 - C7 -4F40 2.6 PGFS_LEIMA
27 PsiBlast_CBE 89.5045% -81 - C7 -4G5D 12.8 PGFS_LEIMA
8 PsiBlast_PDB 89.0345% -84 - C7 -4G5D 12.3 PGFS_LEIMA
40 PsiBlast_CBE 88.8844% -84 - C7 -4Q3M - ? -
120 HHSearch 88.5444% -82 - C7 -1US0 13.3 ALDR_HUMAN
7 PsiBlast_PDB 88.5045% -82 - C7 -4F40 2.4 PGFS_LEIMA
111 HHSearch 88.2741% -78 - C7 -2WZM - Y2407_MYCS2 -
52 PsiBlast_CBE 88.1736% -88 - C7 -3FX4 9.4 AK1A1_PIG
53 PsiBlast_CBE 87.4836% -89 - C7 -3CV7 8.2 AK1A1_PIG
42 PsiBlast_CBE 87.1341% -87 - C7 -4JII 12.3 AK1BA_HUMAN
18 PsiBlast_PDB 86.8941% -89 - C7 -4I5X 12.4 AK1BA_HUMAN
46 PsiBlast_CBE 86.8841% -87 - C7 -4GA8 12.9 AK1BA_HUMAN
19 PsiBlast_PDB 86.7341% -86 - C7 -1ZUA 10.0 AK1BA_HUMAN
54 PsiBlast_CBE 86.6836% -83 - C7 -1HQT 7.7 AK1A1_PIG
44 PsiBlast_CBE 86.3741% -88 - C7 -4JIH 12.1 AK1BA_HUMAN
51 PsiBlast_CBE 86.2436% -88 - C7 -3H4G 7.3 AK1A1_PIG
55 PsiBlast_CBE 86.1236% -90 - C7 -4GAC 3.5 AK1A1_MOUSE
112 HHSearch 85.9044% -76 - C7 -1VBJ 10.8 PGFS_TRYBB
43 PsiBlast_CBE 85.9041% -86 - C7 -4GQG 12.8 AK1BA_HUMAN
34 PsiBlast_CBE 85.8143% -77 - C7 -3WBW 10.4 ?
45 PsiBlast_CBE 85.7541% -85 - C7 -4GAB 12.9 AK1BA_HUMAN
6 PsiBlast_PDB 85.6444% -74 - C7 -1VBJ 10.8 PGFS_TRYBB
127 HHSearch 85.5839% -82 - C7 -3H7U 9.5 AKRC9_ARATH
20 PsiBlast_PDB 85.5541% -87 - C7 -4GQ0 13.0 AK1BA_HUMAN (first)
113 HHSearch 85.2642% -85 - C7 -3O0K 2.9 ?
62 PsiBlast_CBE 85.2441% -85 - C7 -1C9W 12.0 ALD2_CRIGR
26 PsiBlast_CBE 85.1344% -71 - C7 -1VBJ 8.3 PGFS_TRYBB
9 PsiBlast_PDB 85.0644% -68 - C7 -1MZR 2.4 DKGA_ECOLI
11 PsiBlast_PDB 84.7543% -73 - C7 -3WBW 9.2 ?
32 PsiBlast_CBE 84.6243% -88 - C7 -3O0K 2.6 ?
56 PsiBlast_CBE 84.4036% -83 - C7 -4GAC 2.7 AK1A1_MOUSE
13 PsiBlast_PDB 84.3842% -74 - C7 -3WBY 5.5 ?
10 PsiBlast_PDB 84.3243% -85 - C7 -3O0K 2.9 ?
118 HHSearch 84.1844% -73 - C7 -1MZR 2.4 DKGA_ECOLI
57 PsiBlast_CBE 84.1037% -81 - C7 -3H7U 8.8 AKRC9_ARATH
31 PsiBlast_CBE 83.9343% -86 - C7 -3O0K 2.9 ?
121 HHSearch 83.8242% -75 - C7 -3WBW 9.1 ?
69 PsiBlast_CBE 83.7937% -82 - C7 -3UZW 9.9 AK1D1_HUMAN
81 PsiBlast_CBE 83.7137% -82 - C7 -4JQ4 12.7 AK1C2_HUMAN
63 PsiBlast_CBE 83.5937% -80 - C7 -3UZZ 9.9 AK1D1_HUMAN
35 PsiBlast_CBE 83.5942% -75 - C7 -3WBY 4.3 ?
47 PsiBlast_CBE 83.5440% -79 - C7 -1VP5 12.2 ?
48 PsiBlast_CBE 83.4740% -80 - C7 -1VP5 12.5 ?
61 PsiBlast_CBE 83.4140% -86 - C7 -1FRB 12.7 ALD2_MOUSE
70 PsiBlast_CBE 83.3837% -81 - C7 -3UZW 10.0 AK1D1_HUMAN
67 PsiBlast_CBE 82.9337% -81 - C7 -3UZX 10.1 AK1D1_HUMAN
66 PsiBlast_CBE 82.8237% -82 - C7 -3UZY 9.7 AK1D1_HUMAN
123 HHSearch 82.7641% -78 * C7 *1VP5 12.6 ?
30 PsiBlast_CBE 82.7543% -84 - C7 -3O0K 2.8 ?
132 HHSearch 82.7436% -80 - C7 -3KRB 10.3 ?
65 PsiBlast_CBE 82.7337% -81 - C7 -3UZY 10.1 AK1D1_HUMAN
58 PsiBlast_CBE 82.5041% -79 - C7 -1A80 10.8 DKGA_CORSC
68 PsiBlast_CBE 82.3437% -83 - C7 -3UZX 9.8 AK1D1_HUMAN
64 PsiBlast_CBE 81.9537% -81 - C7 -3UZZ 10.2 AK1D1_HUMAN
98 PsiBlast_CBE 81.5239% -79 - C7 -1M9H 8.2 DKGA_CORSC
60 PsiBlast_CBE 52.3141% 19 - C7 -1EKO 7.4 ALDR_PIG