@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1655: (2016-03-27 )
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSISDININDDIEAYRRKLSYIPESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEPFLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQGGDVHA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_2(1JI0)
?
[Raw transfer]




ADP_A_3(4P32)
LPTB_ECOLI
[Raw transfer]




ADP_A_3(4P31)
LPTB_ECOLI
[Raw transfer]




GOL_B_11(4P33)
LPTB_ECOLI
[Raw transfer]




1 PsiBlast_PDB 95.2456%-136 - C1 -4RVC - ? -
2 PsiBlast_PDB 77.7731%-125 - C1 -1VPL - ? -
36 HHSearch 77.7532%-127 - C1 -1VPL - ? -
39 HHSearch 71.7325%-124 - C1 -1B0U - HISP_SALTY -
44 Fugue 69.2826%-116 - C1 -1OXS - ? -
35 HHSearch 67.4629%-122 * C1 *2OLJ - ? -
27 HHSearch 67.1425%-118 - C1 -3TUI - METN_ECOLI -
18 PsiBlast_PDB 66.9529%-128 - C1 -2OLK - ? -
17 PsiBlast_PDB 66.7529%-127 - C1 -2OLJ - ? -
29 HHSearch 66.0426%-113 - C1 -1OXX - ? -
42 Fugue 65.4323%-118 - C1 -3TUZ - METN_ECOLI -
45 Fugue 65.4124%-112 - C1 -1Z47 - ? -
19 PsiBlast_PDB 64.2929%-128 - C1 -2OUK - ? -
37 HHSearch 64.1627%-120 - C1 -3GFO - ECFA3_CLOP1 -
25 HHSearch 63.8224%-112 - C1 -3FVQ - FBPC_NEIG1 -
21 HHSearch 63.4026%-112 - C1 -1Z47 - ? -
26 HHSearch 63.1026%-121 - C1 -3RLF - MALK_ECOLI -
20 PsiBlast_PDB 61.6829%-125 - C1 -2Q0H - ? -
38 HHSearch 61.1428%-121 - C1 -1JI0 7.1 ?
15 PsiBlast_PDB 60.5229%-127 - C1 -3GFO - ECFA3_CLOP1 -