@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1674: (2016-03-27 )
MPVIKINNLNKVFGDNEVLKDINLEINQGEVVAIIGPSGSGKSTLLRCMNLLEVPTKGQVIFEGNDLTEKGTQVDKLRQKMGMVFQNFNLFPHKKVVDNIILAPKLLKKDNNDELHKEALSLLDKVGLKEKADVYPNQLSGGQKQRVAIARALAMHPDVILFDEPTSALDPEVVGDVLKVMKDLAKEGMTMVVVTHEMGFAKDVSDKVIFMADGVVVESGTPVEIFEQPQHERTQNFLARVL

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4YMV)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_B_2(2FFB)

[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




22 PsiBlast_CBE 97.8062%-115 - C1 -4YMU 6.1 ?
4 PsiBlast_PDB 97.2262%-114 - C1 -4YMV 5.9 ?
21 PsiBlast_CBE 96.7862%-113 - C1 -4YMV 5.4 ?
1 PsiBlast_PDB 96.4062%-115 - C1 -4YMS - ? -
9 PsiBlast_PDB 96.2560%-112 - C1 -2OUK - ? -
3 PsiBlast_PDB 96.1862%-113 - C1 -4YMU 6.5 ?
2 PsiBlast_PDB 96.0662%-116 - C1 -4YMT - ? -
5 PsiBlast_PDB 96.0262%-113 - C1 -4YMW - ? -
29 PsiBlast_CBE 94.7660%-111 - C1 -2OLK 6.0 ?
11 PsiBlast_PDB 94.2860%-108 - C1 -3C4J 6.8 ?
30 PsiBlast_CBE 94.2360%-106 - C1 -2OLK 6.1 ?
10 PsiBlast_PDB 94.2060%-108 - C1 -2Q0H 5.5 ?
31 PsiBlast_CBE 94.1360%-108 - C1 -2OLK 6.0 ?
7 PsiBlast_PDB 93.6860%-112 - C1 -2OLJ 5.8 ?
112 HHSearch 93.3760%-111 - C1 -2OLJ - ? -
24 PsiBlast_CBE 93.3560%-114 - C1 -3C4J 5.1 ?
8 PsiBlast_PDB 93.3260%-107 - C1 -2OLK 6.0 ?
6 PsiBlast_PDB 93.2259%-103 - C1 -3C41 6.2 ?
27 PsiBlast_CBE 93.1760%-108 - C1 -2OUK - ? -
25 PsiBlast_CBE 93.1560%-109 - C1 -2Q0H 5.8 ?
23 PsiBlast_CBE 92.8159%-106 - C1 -3C41 5.8 ?
32 PsiBlast_CBE 92.6260%-106 - C1 -2OLJ 5.8 ?
12 PsiBlast_PDB 90.8956%-106 - C1 -4U00 5.9 ?
48 PsiBlast_CBE 78.2742%-121 - C1 -3TIF 6.1 Y796_METJA
47 PsiBlast_CBE 77.3242%-121 - C1 -3TIF 6.4 Y796_METJA
45 PsiBlast_CBE 77.1042%-124 - C1 -1L2T 6.2 Y796_METJA
46 PsiBlast_CBE 75.9742%-121 - C1 -1L2T 6.6 Y796_METJA
50 PsiBlast_CBE 70.7037% -95 - C1 -4MKI 2.2 ECFA2_CALS4
51 PsiBlast_CBE 70.1637% -95 - C1 -4MKI 2.0 ECFA2_CALS4
49 PsiBlast_CBE 65.9635% -93 - C1 -1VCI 3.9 ?
93 PsiBlast_CBE 65.7937% -93 - C1 -3FVQ 7.7 FBPC_NEIG1
94 PsiBlast_CBE 65.6437% -92 - C1 -3FVQ 7.0 FBPC_NEIG1
99 PsiBlast_CBE 52.4535% -95 - C1 -2FGK 6.4 HLYBP_ECOLX
84 PsiBlast_CBE 52.0335% -97 - C1 -2FF7 5.4
100 PsiBlast_CBE 51.7135% -92 - C1 -2FFB 5.5
83 PsiBlast_CBE 50.7835% -94 - C1 -2PMK 5.4
95 PsiBlast_CBE 50.7635% -94 - C1 -3B5J 5.6
97 PsiBlast_CBE 50.3235% -93 - C1 -2FGK 5.6 HLYBP_ECOLX
96 PsiBlast_CBE 49.5135% -90 - C1 -2FGK 6.2
98 PsiBlast_CBE 49.2235% -90 - C1 -2FGK 6.2 HLYBP_ECOLX