@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1681: (2016-03-28 )
MNFSESERLQQLSNEYILGGVNSPSRSYKAVGGGAPVVMKEGHGAYLYDVDGNKFIDYLQAYGPIIAGHAHPHITKAIQEQAAKGVLFGTPTELEIEFSKKLRDAIPSLEKIRFVNSGTEAVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPESVAREVITVPFNDINAYKEAIEFWGDEIAAVLVEPIVGNFGMVMPQPGFLEEVNEISHNNGTLVIYDEVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAWFLTTEHTEEDIQQTLKAADYAFSQMK

Atome Classification :

(53 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PMP_A_3(2GSA)
GSA_SYNP6
[Raw transfer]




PMP_C_3(3GSB)
GSA_SYNP6
[Raw transfer]




PMP_B_5(3FQA)
GSA_SYNP6
[Raw transfer]




EA5_A_3(2HP1)
GSA_SYNP6
[Raw transfer]




PMP_A_3(3FQ8)
GSA_SYNP6
[Raw transfer]




PMP_A_3(2GSA)
GSA_SYNP6
[Raw transfer]




PMP_B_4(2HOZ)
GSA_SYNP6
[Raw transfer]




PMP_A_3(3FQ8)
GSA_SYNP6
[Raw transfer]




PXG_B_4(3FQ7)
GSA_SYNP6
[Raw transfer]




PMP_A_3(3FQA)
GSA_SYNP6
[Raw transfer]




KE4_A_3(2HP2)
GSA_SYNP6
[Raw transfer]




PMP_E_5(3GSB)
GSA_SYNP6
[Raw transfer]




IK2_C_18(2YKV)
?
[Raw transfer]




IK2_A_3(4AOA)
BFAT_VARPD
[Raw transfer]




PMP_A_4(2E7U)
GSA_THET8
[Raw transfer]




PLK_A_4(4AO4)
?
[Raw transfer]




PMP_A_4(2E7U)
GSA_THET8
[Raw transfer]




IK2_B_11(2YKV)
?
[Raw transfer]




PMP_B_4(3FQ8)
GSA_SYNP6
[Raw transfer]




PLR_A_3(3USF)
GSA_SYNE7
[Raw transfer]




PLK_C_12(4AO4)
?
[Raw transfer]




PMP_A_2(3BS8)
GSA_BACSU
[Raw transfer]




PLK_B_7(4AO4)
?
[Raw transfer]




IK2_A_4(2YKV)
?
[Raw transfer]




PMP_A_2(2EPJ)
GSA_AERPE
[Raw transfer]




PMP_C_8(2ZSM)
GSA_AERPE
[Raw transfer]




PMP_A_2(2ZSL)
GSA_AERPE
[Raw transfer]




PLR_B_5(3USF)
GSA_SYNE7
[Raw transfer]




IK2_B_5(4AOA)
BFAT_VARPD
[Raw transfer]




PMP_B_6(2ZSM)
GSA_AERPE
[Raw transfer]




PMP_A_2(2EPJ)
GSA_AERPE
[Raw transfer]




PLP_A_5(2YKY)
?
[Raw transfer]




PLP_B_11(2YKY)
?
[Raw transfer]




PLP_C_21(2YKY)
?
[Raw transfer]




PLR_A_3(2CFB)
GSA_THEEB
[Raw transfer]




PMP_A_4(2ZSM)
GSA_AERPE
[Raw transfer]




PLP_B_4(2HP1)
GSA_SYNP6
[Raw transfer]




PLP_B_4(2GSA)
GSA_SYNP6
[Raw transfer]




PLP_B_10(2YKU)
?
[Raw transfer]




PLP_B_4(4GSA)
GSA_SYNP6
[Raw transfer]




PLP_B_9(2YKX)
?
[Raw transfer]




PLP_C_17(2YKU)
?
[Raw transfer]




PLP_A_3(4AO9)
BFAT_VARPD
[Raw transfer]




PLP_A_4(2YKU)
?
[Raw transfer]




PLP_C_11(2YKX)
?
[Raw transfer]




PLP_A_4(2YKX)
?
[Raw transfer]




PLP_B_4(4AO9)
BFAT_VARPD
[Raw transfer]




PLP_A_3(4GSA)
GSA_SYNP6
[Raw transfer]




PLP_B_4(2HP2)
GSA_SYNP6
[Raw transfer]




PLP_B_4(2EH6)
ARGD_AQUAE
[Raw transfer]




PLP_A_3(2EH6)
ARGD_AQUAE
[Raw transfer]




HOZ_A_4(3USF)
GSA_SYNE7
[Raw transfer]




GAB_D_4(3GSB)
GSA_SYNP6
[Raw transfer]




GAB_A_4(3FQA)
GSA_SYNP6
[Raw transfer]




HOZ_B_5(2HP2)
GSA_SYNP6
[Raw transfer]




EDO_C_22(2YKV)
?
[Raw transfer]




AKG_C_13(2YKX)
?
[Raw transfer]




AKG_B_10(2YKX)
?
[Raw transfer]




21 PsiBlast_CBE 92.7748% -86 - C1 -3FQ8 4.1 GSA_SYNP6
2 PsiBlast_PDB 92.7048% -87 - C1 -3FQ8 4.8 GSA_SYNP6
5 PsiBlast_PDB 92.4547% -93 - C1 -2HOZ - GSA_SYNP6 -
114 HHSearch 92.1048% -85 - C1 -3FQ8 4.8 GSA_SYNP6
3 PsiBlast_PDB 91.6448% -88 - C1 -3FQA 4.0 GSA_SYNP6
8 PsiBlast_PDB 91.3647% -87 - C1 -3FQ7 - GSA_SYNP6 -
6 PsiBlast_PDB 90.7247% -88 - C1 -2HP1 3.8 GSA_SYNP6
28 PsiBlast_CBE 90.6047% -86 - C1 -3FQ7 4.0 GSA_SYNP6
22 PsiBlast_CBE 90.4148% -86 - C1 -3FQA 4.3 GSA_SYNP6
10 PsiBlast_PDB 90.2147% -84 - C1 -2GSA 4.3 GSA_SYNP6
103 Fugue 90.0647% -83 - C1 -2GSA 4.3 GSA_SYNP6
25 PsiBlast_CBE 90.0247% -92 - C1 -2HOZ 3.6 GSA_SYNP6
29 PsiBlast_CBE 90.0147% -86 * C1 *4GSA 3.3 GSA_SYNP6
7 PsiBlast_PDB 89.6747% -89 - C1 -2HP2 4.4 GSA_SYNP6
9 PsiBlast_PDB 89.6347% -86 - C1 -3USF 3.6 GSA_SYNE7
11 PsiBlast_PDB 89.4047% -85 - C1 -4GSA 3.2 GSA_SYNP6
30 PsiBlast_CBE 89.3947% -86 - C1 -3GSB 3.9 GSA_SYNP6
1 PsiBlast_PDB 89.3347% -90 - C1 -3BS8 3.5 GSA_BACSU
31 PsiBlast_CBE 89.1447% -87 - C1 -2GSA 3.5 GSA_SYNP6
23 PsiBlast_CBE 88.6547% -83 - C1 -2HP2 3.0 GSA_SYNP6
12 PsiBlast_PDB 88.4847% -88 - C1 -3GSB 4.4 GSA_SYNP6
14 PsiBlast_PDB 88.4046% -87 - C1 -2E7U 3.8 GSA_THET8
113 HHSearch 87.9547% -84 - C1 -2E7U 3.8 GSA_THET8
27 PsiBlast_CBE 86.1047% -91 - C1 -3USF 4.0 GSA_SYNE7
24 PsiBlast_CBE 84.8147% -91 - C1 -2HP1 3.8 GSA_SYNP6
13 PsiBlast_PDB 80.8349% -98 - C1 -2CFB 2.9 GSA_THEEB
33 PsiBlast_CBE 77.8740% -86 - C1 -2ZSM 3.9 GSA_AERPE
17 PsiBlast_PDB 77.1740% -84 - C1 -2ZSM 4.0 GSA_AERPE
32 PsiBlast_CBE 77.1140% -84 - C1 -2ZSM 4.1 GSA_AERPE
16 PsiBlast_PDB 75.9840% -82 - C1 -2ZSL 4.4 GSA_AERPE
15 PsiBlast_PDB 75.9740% -83 - C1 -2EPJ 4.4 GSA_AERPE
121 HHSearch 70.5937% -74 - C1 -2EPJ 4.4 GSA_AERPE
49 PsiBlast_CBE 67.0931% -91 - C1 -4AO9 3.2 BFAT_VARPD
46 PsiBlast_CBE 66.4631% -90 - C1 -4AOA 4.3 BFAT_VARPD
48 PsiBlast_CBE 66.1031% -91 - C1 -4AO9 3.1 BFAT_VARPD
47 PsiBlast_CBE 63.1931% -88 - C1 -4AOA 4.6 BFAT_VARPD
37 PsiBlast_CBE 61.0232% -83 - C1 -2YKY 4.4 ?
19 PsiBlast_PDB 60.7232% -83 - C1 -2YKV 4.2 ?
38 PsiBlast_CBE 60.6832% -82 - C1 -2YKY 4.2 ?
34 PsiBlast_CBE 60.3732% -85 - C1 -4AO4 4.9 ?
40 PsiBlast_CBE 60.3632% -84 - C1 -2YKX 3.1 ?
36 PsiBlast_CBE 60.1632% -85 - C1 -4AO4 5.2 ?
45 PsiBlast_CBE 60.0832% -83 - C1 -2YKU 3.1 ?
44 PsiBlast_CBE 60.0332% -83 - C1 -2YKU 2.9 ?
43 PsiBlast_CBE 60.0132% -83 - C1 -2YKV 4.2 ?
42 PsiBlast_CBE 60.0032% -83 - C1 -2YKV 3.9 ?
39 PsiBlast_CBE 60.0032% -82 - C1 -2YKY 4.1 ?
41 PsiBlast_CBE 59.4332% -84 - C1 -2YKX 3.1 ?
35 PsiBlast_CBE 59.2132% -82 - C1 -4AO4 5.2 ?
20 PsiBlast_PDB 59.1032% -82 - C1 -2YKX 3.2 ?
18 PsiBlast_PDB 58.9932% -82 - C1 -2YKU 4.3 ?
88 PsiBlast_CBE 36.8931% -73 - C1 -2EH6 2.5 ARGD_AQUAE
89 PsiBlast_CBE 36.1031% -73 - C1 -2EH6 3.2 ARGD_AQUAE