@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1683: (2016-03-28 )
MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQNL

Atome Classification :

(53 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]



ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]



ATP_H_8(2FGK)

[Raw transfer]



ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]



ATP_C_9(1MV5)
LMRA_LACLA
[Raw transfer]



ATP_H_8(2FGJ)

[Raw transfer]



ATP_C_11(1XEF)
HLYBP_ECOLX
[Raw transfer]



ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]



ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]



ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]



ADP_A_2(3NHB)

[Raw transfer]



ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]



ADP_A_3(3NHA)

[Raw transfer]



ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]



ADP_B_2(2FFA)

[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ATP_D_12(1XEF)

[Raw transfer]



ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]



ATP_A_9(1XEF)
HLYBP_ECOLX
[Raw transfer]



ATP_A_7(1MV5)
LMRA_LACLA
[Raw transfer]



ATP_B_10(1XEF)
HLYBP_ECOLX
[Raw transfer]



ADP_B_2(2FFB)

[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



ATP_A_3(3VX4)
?
[Raw transfer]



ATP_D_5(3VX4)
?
[Raw transfer]



ADP_B_2(2FF7)

[Raw transfer]



ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]



AGS_A_3(4S0F)
?
[Raw transfer]



ADP_B_2(2FF7)

[Raw transfer]



ATP_A_2(3NH9)

[Raw transfer]



ATP_A_3(3VX4)
?
[Raw transfer]



ADP_A_2(5DGX)
?
[Raw transfer]



ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]



AGS_B_4(4S0F)
?
[Raw transfer]



BME_A_2(3NH6)

[Raw transfer]



BME_A_2(3NH6)

[Raw transfer]



ATP_C_9(1MV5)
LMRA_LACLA
[Raw transfer]



ATP_A_7(1MV5)

[Raw transfer]
22 PsiBlast_CBE 90.55100%-127 - C1 -2HYD 4.3 Y1866_STAAM
1 PsiBlast_PDB 90.55100%-127 - C1 -2HYD 4.5 Y1866_STAAM
21 PsiBlast_CBE 90.26100%-127 - C1 -2ONJ 6.1 Y1866_STAAM
2 PsiBlast_PDB 90.26100%-127 - C1 -2ONJ 6.1 Y1866_STAAM
3 PsiBlast_PDB 75.41100%-122 - C1 -4A82 - Y1866_STAAM -
13 PsiBlast_PDB 67.3933%-123 - C1 -4RY2 - ? -
18 PsiBlast_PDB 66.2033%-109 - C1 -4AYW - ABCBA_HUMAN -
106 HHSearch 65.2630%-111 - C1 -3WMG - ? -
16 PsiBlast_PDB 65.0833%-109 - C1 -4AYX - ABCBA_HUMAN -
127 Fugue 65.0330%-109 - C1 -4F4C - PGP1_CAEEL -
4 PsiBlast_PDB 64.8439%-113 - C1 -3QF4 - Y288_THEMA -
32 PsiBlast_CBE 64.7833%-107 - C1 -4S0F 3.5 ?
17 PsiBlast_PDB 64.3033%-107 - C1 -3ZDQ - ABCBA_HUMAN -
105 HHSearch 64.1133%-108 - C1 -3ZDQ - ABCBA_HUMAN -
5 PsiBlast_PDB 63.9939%-113 - C1 -4Q4A - Y288_THEMA -
6 PsiBlast_PDB 63.7939%-108 - C1 -4Q4H - Y288_THEMA -
15 PsiBlast_PDB 63.7833%-108 - C1 -4AYT - ABCBA_HUMAN -
46 PsiBlast_CBE 63.6034%-103 - C1 -4M1M - MDR1A_MOUSE -
20 PsiBlast_PDB 63.4834%-106 - C1 -3WMG - ? -
7 PsiBlast_PDB 62.8439%-110 - C1 -4Q4J - Y288_THEMA -
14 PsiBlast_PDB 62.7033%-103 - C1 -4S0F 4.9 ?
72 PsiBlast_CBE 48.8450%-105 - C1 -1XEF 7.3 HLYBP_ECOLX
70 PsiBlast_CBE 48.3850%-102 - C1 -1XEF 7.1
107 HHSearch 48.2847% -92 - C1 -3NH6 2.8
71 PsiBlast_CBE 48.2650%-107 - C1 -1XEF 7.4 HLYBP_ECOLX
66 PsiBlast_CBE 48.2550%-100 - C1 -2FGJ 7.1 HLYBP_ECOLX
38 PsiBlast_CBE 48.0447% -91 - C1 -3NH6 2.8
37 PsiBlast_CBE 47.8647% -90 - C1 -3NH9 6.2
65 PsiBlast_CBE 47.8550%-104 - C1 -2FGJ 7.1
73 PsiBlast_CBE 47.7650%-103 - C1 -1XEF 6.6 HLYBP_ECOLX
112 HHSearch 47.4950%-106 - C1 -2FF7 6.5
58 PsiBlast_CBE 47.1850%-107 - C1 -2PMK 7.0
56 PsiBlast_CBE 46.9450%-106 - C1 -2FF7 6.5
62 PsiBlast_CBE 46.4950%-100 - C1 -2FGK 7.7 HLYBP_ECOLX
69 PsiBlast_CBE 46.4050%-104 - C1 -2FFA 6.5
59 PsiBlast_CBE 46.4050%-103 - C1 -2FGK 7.3
68 PsiBlast_CBE 46.2850% -99 - C1 -2FGJ 7.1 HLYBP_ECOLX
63 PsiBlast_CBE 46.0350%-105 - C1 -2FFB 6.3
36 PsiBlast_CBE 45.7647% -93 - C1 -3NHA 6.6
35 PsiBlast_CBE 45.7247% -94 - C1 -3NHB 6.7
61 PsiBlast_CBE 45.6250%-103 - C1 -2FGK 7.3 HLYBP_ECOLX
67 PsiBlast_CBE 45.5550%-102 - C1 -2FGJ 7.4 HLYBP_ECOLX
88 PsiBlast_CBE 45.4741% -95 - C1 -3VX4 7.0 ?
64 PsiBlast_CBE 45.0650%-107 - C1 -3B5J 6.8
60 PsiBlast_CBE 44.7150% -99 - C1 -2FGK 6.9 HLYBP_ECOLX
109 HHSearch 44.5737% -89 - C1 -3VX4 7.0 ?
87 PsiBlast_CBE 43.9641% -96 - C1 -3VX4 6.6 ?
76 PsiBlast_CBE 43.9350% -87 - C1 -1MV5 4.8 LMRA_LACLA
75 PsiBlast_CBE 43.5850% -96 - C1 -1MV5 5.5 LMRA_LACLA
113 HHSearch 42.3550% -99 - C1 -1MV5 6.4 LMRA_LACLA
78 PsiBlast_CBE 41.6846% -95 - C1 -5DGX 6.7 ?
77 PsiBlast_CBE 41.5050% -94 - C1 -1MV5 6.4 LMRA_LACLA
74 PsiBlast_CBE 40.7950% -93 - C1 -1MV5 4.0