@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1685: (2016-03-28 )
MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNNQGQYLLQKRSEKLLHGMWQFPMFESEHARRKMTEKIGHDIQPVETPIFELKHQFTHLTWKIKVYAASGAINIETLPDDMIWFNLSDRDQYTFPVPMSKIYQFING

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADE_A_6(1VRL)
?
[Raw transfer]



ADE_A_2(1WEI)
MUTY_ECOLI
[Raw transfer]



IMD_A_4(1WEG)
MUTY_ECOLI
[Raw transfer]



IMD_A_7(1MUN)
MUTY_ECOLI
[Raw transfer]



IMD_A_4(1MUY)
MUTY_ECOLI
[Raw transfer]



NACID_E_5(4YPR)
?
[Raw transfer]
-
NACID_C_3(4YPR)
?
[Raw transfer]
-
GOL_A_6(1KQJ)
MUTY_ECOLI
[Raw transfer]



GOL_A_9(1KG6)
MUTY_ECOLI
[Raw transfer]



GOL_A_7(1KG5)
MUTY_ECOLI
[Raw transfer]



GOL_A_4(1KG5)
MUTY_ECOLI
[Raw transfer]



NACID_B_2(3G0Q)
?
[Raw transfer]
-
NACID_B_2(3FSP)
?
[Raw transfer]
-
NACID_F_6(4YPR)
?
[Raw transfer]
-
NACID_B_2(3FSP)
?
[Raw transfer]
-
IMD_A_6(1MUN)
MUTY_ECOLI
[Raw transfer]



NACID_B_1(1RRS)
?
[Raw transfer]
-
ADE_A_4(1MUD)
MUTY_ECOLI
[Raw transfer]



NACID_B_1(1RRQ)
?
[Raw transfer]
-
NACID_D_4(4YPR)
?
[Raw transfer]
-
NACID_B_1(1RRQ)
?
[Raw transfer]
-
NACID_B_1(1VRL)
?
[Raw transfer]
-
NACID_B_2(4YOQ)
?
[Raw transfer]
-
EDO_A_3(1WEG)
MUTY_ECOLI
[Raw transfer]



NACID_B_2(4YPH)
?
[Raw transfer]
-
25 HHSearch 94.1444% -97 * C2 *3FSP 10.4 ?
1 PsiBlast_PDB 93.7444% -99 - C2 -3FSP 10.5 ?
4 PsiBlast_PDB 93.6544%-100 - C2 -4YPH 10.5 ?
3 PsiBlast_PDB 93.4044% -98 - C2 -4YOQ 13.2 ?
8 PsiBlast_PDB 93.1744% -95 - C2 -4YPR 11.7 ?
5 PsiBlast_PDB 93.0544% -99 - C2 -1RRS 11.0 ?
6 PsiBlast_PDB 92.5144% -98 - C2 -1VRL 10.7 ?
48 Fugue 92.4844% -93 - C2 -1RRQ 11.3 ?
21 PsiBlast_CBE 91.5244% -94 - C2 -4YPR 13.4 ?
2 PsiBlast_PDB 91.4945%-101 - C2 -3G0Q 11.5 ?
7 PsiBlast_PDB 91.4044% -99 - C2 -1RRQ 11.2 ?
23 PsiBlast_CBE 77.7939%-101 - C2 -3N5N - MUTYH_HUMAN -
24 PsiBlast_CBE 76.9839%-101 - C2 -3N5N - MUTYH_HUMAN -
26 HHSearch 75.9541% -95 - C2 -3N5N - MUTYH_HUMAN -
16 PsiBlast_PDB 75.8242% -85 - C2 -1WEF - MUTY_ECOLI -
27 HHSearch 75.4841% -93 - C2 -1KG2 - MUTY_ECOLI -
9 PsiBlast_PDB 75.3941% -89 - C2 -1KG4 - MUTY_ECOLI -
15 PsiBlast_PDB 75.3341% -91 - C2 -1KG5 2.3 MUTY_ECOLI
11 PsiBlast_PDB 74.8941% -88 - C2 -1KG6 2.2 MUTY_ECOLI
10 PsiBlast_PDB 74.8041% -87 - C2 -1WEG 4.0 MUTY_ECOLI
19 PsiBlast_PDB 74.6741% -86 - C2 -1MUD 5.4 MUTY_ECOLI
12 PsiBlast_PDB 74.5141% -88 - C2 -1MUY 3.6 MUTY_ECOLI
22 PsiBlast_CBE 74.2541% -83 - C2 -1KQJ 2.9 MUTY_ECOLI
17 PsiBlast_PDB 74.1742% -83 - C2 -1WEI 2.9 MUTY_ECOLI
20 PsiBlast_PDB 73.8741% -86 - C2 -1MUN 4.1 MUTY_ECOLI